Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1232 ATGTTTTTTGAATCCATGTTTTGCTTTCTCAGAAGAATCGTCCCTTCTCGGAGGCATATCTCTCCTTCAACATTACAACAATTACCTCGCGTTCAAAATCAATGGCTACCTTCCACTGTCAGGTACTGTAATTCAATTTCAACCAATGGGAATTCTTTCACAATCTCATATCTCATTGACACTTGTGGCTTCTCACCCGAAGAAGCTGCTTCAGCTTCCAAGTATGTCCGCTTCGAATCGCGAGAAAAATCCGATTTGGTTATCAATTTCTTGAAGAATCTGGGATTGTCACAATCTCAAATTCTTCGTTGCACAAGGGAAGTCCCTCAAATACTTCGATATGACACTGAGAAATCCTTACTCCCTAAGATCGAGTTTTTCATATCCAGAGGCGTTTCGAGCTCAGACATCCCTAGGCTCTTATGTAGTTGTCCTTCCATAATGAAAAGAAGCTTAAATAAGCAGCTCATTCCTTCTTTTGATTTCTTTCGAGGTTTGTTTCAATCTAATGACAAGCTCATTCAAGCTCTTAAATATTGCTCTCGAATTCTTCTTGATATCAACACCCATGCCGTGCCCAATATGAATCTATTAAAAGAAGTCGGAGTTCCTAAATCAAACATAATCAAATTGTTGCAATTGTATCCTAGGACATTCACTGAAAGTCCTGGTAAATTCACTGTGATAGTTGAGCAAGTTCAGGAAATGAGTATTGATCCTTCAAAGTGTCAATTTATTATGGCCGTTTATGCATTGTCGTCACTAAGCAAAGCTACATGGTCAAAGAAGGCTAATGTTTACAAGAAGTGGGGCTGGTCTGACGATGAAATTGTAGCTGCGTTTAGAAGGTCTCCGTTTTGTATGAAGAAATCTGAGGATAAAATTGATGCAACAATGGAGCTTCTTGTTGACAAATTGGGTTGTCCGCCTTCCACTATTCCCAATTATGCAGTAGTTCTGTCACTTAGTTTGAATAAGCGAATTGTTCCACGGGCTTCTGTCTTTCAAGTGTTGTTGTCAAAGGGTCTGGTGAAAAAGAAGAGCTTGCTTTCAATATTTGTCTGCACTGAAAGGTACTTTTTAAATAGATTTATCCTGAGTCATGGGGAAGAAGGTAGTGAACTCCTGAAACTGTATCAGGCTAAACTAGATCTTGCAGGATAA 1164 0.3918 MFFESMFCFLRRIVPSRRHISPSTLQQLPRVQNQWLPSTVRYCNSISTNGNSFTISYLIDTCGFSPEEAASASKYVRFESREKSDLVINFLKNLGLSQSQILRCTREVPQILRYDTEKSLLPKIEFFISRGVSSSDIPRLLCSCPSIMKRSLNKQLIPSFDFFRGLFQSNDKLIQALKYCSRILLDINTHAVPNMNLLKEVGVPKSNIIKLLQLYPRTFTESPGKFTVIVEQVQEMSIDPSKCQFIMAVYALSSLSKATWSKKANVYKKWGWSDDEIVAAFRRSPFCMKKSEDKIDATMELLVDKLGCPPSTIPNYAVVLSLSLNKRIVPRASVFQVLLSKGLVKKKSLLSIFVCTERYFLNRFILSHGEEGSELLKLYQAKLDLAG 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1232 387 SMART mt_12 310 344 IPR003690 GO:0003690|GO:0006355
Acco08g1232 387 SMART mt_12 174 204 IPR003690 GO:0003690|GO:0006355
Acco08g1232 387 SMART mt_12 102 133 IPR003690 GO:0003690|GO:0006355
Acco08g1232 387 SMART mt_12 209 239 IPR003690 GO:0003690|GO:0006355
Acco08g1232 387 SMART mt_12 138 169 IPR003690 GO:0003690|GO:0006355
Acco08g1232 387 SMART mt_12 278 309 IPR003690 GO:0003690|GO:0006355
Acco08g1232 387 FunFam Mitochondrial transcription termination factor-like 152 371 - -
Acco08g1232 387 Gene3D Transcription termination factor 3, mitochondrial 169 377 IPR038538 -
Acco08g1232 387 PANTHER CGI-12 PROTEIN-RELATED 49 368 IPR003690 GO:0003690|GO:0006355
Acco08g1232 387 Pfam mTERF 88 311 IPR003690 GO:0003690|GO:0006355
Acco08g1232 387 Pfam mTERF 215 360 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1232 Acco-ChrAcco08 13442597 13445073 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Acco08g1232 mTERF 8.8e-29 No_clan