Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1228 ATGTCCCGTTTTCTCAGCAGAGCGACTGCTTGTCGGCGGCACATTATCAACGCAATTTCTCCTTCAACATTTCAAAATCTGTTTTCTGCTCAAATCCAATGGCTTTCTGTGAGGTACGCAACTTCAACCGCCTCAAATAATGCCCTTACTTTCACAGTCTCATATCTAATTGACACATGTGGCTTCTCCCCTCAAGATGCTGAAGCAGCTTCGAAGCGTGTCAGCTTAGAAACGCGAGATAAGCCAGATGTAGTCATCAATTTCCTGAAAACACAAGGATTTTCTGGATCCCAGATTCTTCGTTTCATTAGAAATGACCCTGAATTTCTTCGATATGATCCTGACAAAACCTTTGTCCCCAAGATTGAGTTTCTCAAATCCCAAGGTGTTTCGAGCTCACTCATCCCTAGGCTCTTATGTAGTTGCCCTACCATTATGGGGAGTAGCTTGAGTAATCAGCTCATTCCTTCCTTTCATTTCTTTAGGAATATGTTTCAATCCGATGAGAGGCTTATTAAAGCTCTCACATATTGCTCTCACATTCTTCTACGCATTAACACACATGTCTTGCCTAATATGATGCTGTTGCGAGAAGAAGGTGTTCCCGAATCAAATATCATGAAATTGTTGCAGTTTTTCCCTAGGACACTAACTAGAAAACCTGCTCGGTTTAAGGGCGTTGTGGAAGAGGTGAAGGAAATCGGGCTTGATCCTTTGAAGTTTAACTTTCTTATGGCTGTTAGGGTATGCTTATCCATTAGCAAATCCACACGAGCAAAAAAGGCTTATGTTTATAAGAAGTGGGGTTGGTCCGACAATGACATTGTTGCAGCATTTAGAAAGTACCCTTTTTGTATGACTGTCTCAGAGGATAAGATTGATGCAATAATGGAGTTTCTTGTCCTCAAGTTGGGCTATGAGTCTTCCATTATCAACAGATGTCCTTCAGTTTTGGCATTGAGTTTGCAAAGGCGAATTCTTCCAAGAGGTGCTGTCATTCATGTTCTGTTGTCAAAGGGTCTGATGATGGGGAAAACTTCATTATCAATATTTAAGTATTCTGAAATTCACTTCTTAAAGAAGTTTCTGGTTTATCATGGGCAGAAAGTTAGTGGATTATTGGATTTGTATCAGTCTAAATTGGATCTTGCAAGGTGA 1158 0.4059 MSRFLSRATACRRHIINAISPSTFQNLFSAQIQWLSVRYATSTASNNALTFTVSYLIDTCGFSPQDAEAASKRVSLETRDKPDVVINFLKTQGFSGSQILRFIRNDPEFLRYDPDKTFVPKIEFLKSQGVSSSLIPRLLCSCPTIMGSSLSNQLIPSFHFFRNMFQSDERLIKALTYCSHILLRINTHVLPNMMLLREEGVPESNIMKLLQFFPRTLTRKPARFKGVVEEVKEIGLDPLKFNFLMAVRVCLSISKSTRAKKAYVYKKWGWSDNDIVAAFRKYPFCMTVSEDKIDAIMEFLVLKLGYESSIINRCPSVLALSLQRRILPRGAVIHVLLSKGLMMGKTSLSIFKYSEIHFLKKFLVYHGQKVSGLLDLYQSKLDLAR 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1228 385 Pfam mTERF 223 349 IPR003690 GO:0003690|GO:0006355
Acco08g1228 385 Pfam mTERF 86 237 IPR003690 GO:0003690|GO:0006355
Acco08g1228 385 Gene3D Transcription termination factor 3, mitochondrial 166 366 IPR038538 -
Acco08g1228 385 FunFam Mitochondrial transcription termination factor-like 150 370 - -
Acco08g1228 385 PANTHER CGI-12 PROTEIN-RELATED 51 364 IPR003690 GO:0003690|GO:0006355
Acco08g1228 385 SMART mt_12 207 237 IPR003690 GO:0003690|GO:0006355
Acco08g1228 385 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Acco08g1228 385 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Acco08g1228 385 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Acco08g1228 385 SMART mt_12 308 342 IPR003690 GO:0003690|GO:0006355
Acco08g1228 385 SMART mt_12 172 202 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1228 Acco-ChrAcco08 13388514 13389671 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Acco08g1228 mTERF 1e-18 No_clan