Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1227 ATGTTTACTTTTCTGCGCAGAGCCATCCCTTATCGGAGGCATGTTAGCAACGCAATCTCTCCTTCTTCAACGTTTCAGATTCAACTTTGTCTCCAAACCCAGTGGTCTTCTGTGAGGTACGCTAACTCAAATGCCTCAAAAGGGAATTCTTTCACTGTCTCTTATCTCATTGATTCCTGTGGCTTCTCACCCCAAAAGGCTGAAGCAGCTTCTAAGCGTGTCAGCCTCGAAACGCGAGATAAGCCAGATCTGGTTATCAAGTTCCTCAAAAGTCATGGATTCTCACAACCCCAGATCCTTCGTCTCATTAGAAATGTTCCAGAGCTTCTTCGATTTGATCCTGAGAAAATCTTTCTGCCCAAGATTGAATTCTTCAAATCCAGAGGCATTTCGAGTTCACACATCCCTAGGCTCATTTGTAGTTCTCCTAACATCATGAGAAGAAGCTTAAGTAAACATCTCATTCCTTCCTTTAATTTCCTTCAAGATTTGTTTCAATCTGATGAGAAGCTCATTAAATCTCTTCAATATTGCTCGGCCATTCTTCTTGATCCTAAAACCTTTGTAGTAGTGCCTAAAATGGAGCTACTGCGAGAAGCAGGAGTTCCTCAATCAAACATCATCAAATATTTGCAGTTTTTCTCTAGAACATTGATTTGTAATCCTGGTCGATTTAAGAAGGTTGTGGAGGAAGTGAAAGAACTTGGTTTTGATCCTTTGACGTTTCAATTTCTAGTGGCTGTTCATGTGTGCATAAGCTTGAAAAAATCCACAAGGGATAAAAAGGCTGATGTGTATAAGAAGTGGGGTTGGTCTGACAACGACATTGCTGCAGCATTTAGAAAGTTCCCTGTCTGTATGACATTGTCTGAAGACCAGATTGATGCAAAATTAGAGTTTTTTGTCAATCAATTGGGCTGTAACCCTTCCAGTGTTATCAAATACCCTAATGTTTTGGGATATAGTTTGAAAAAAAGAATTGCTCCAAGAGCTGCTGTCCTTCAACTTCTGTTGTCAAAGGGTCTGATGAAAAGTGAATCTTTTCTTGTAAAATTTATGCCAACTGAAAAGGACTTCCTTAGGAGTCTTGTCCTTTGTCATGAGCCAGAAGTAGGAAAAGAGTTATTGGAGTTGTATCGCTCGAAACTGGATCAAGCTAGATGA 1164 0.4012 MFTFLRRAIPYRRHVSNAISPSSTFQIQLCLQTQWSSVRYANSNASKGNSFTVSYLIDSCGFSPQKAEAASKRVSLETRDKPDLVIKFLKSHGFSQPQILRLIRNVPELLRFDPEKIFLPKIEFFKSRGISSSHIPRLICSSPNIMRRSLSKHLIPSFNFLQDLFQSDEKLIKSLQYCSAILLDPKTFVVVPKMELLREAGVPQSNIIKYLQFFSRTLICNPGRFKKVVEEVKELGFDPLTFQFLVAVHVCISLKKSTRDKKADVYKKWGWSDNDIAAAFRKFPVCMTLSEDQIDAKLEFFVNQLGCNPSSVIKYPNVLGYSLKKRIAPRAAVLQLLLSKGLMKSESFLVKFMPTEKDFLRSLVLCHEPEVGKELLELYRSKLDQAR 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1227 387 Pfam mTERF 250 349 IPR003690 GO:0003690|GO:0006355
Acco08g1227 387 Pfam mTERF 86 238 IPR003690 GO:0003690|GO:0006355
Acco08g1227 387 Gene3D Transcription termination factor 3, mitochondrial 151 370 IPR038538 -
Acco08g1227 387 PANTHER CGI-12 PROTEIN-RELATED 47 367 IPR003690 GO:0003690|GO:0006355
Acco08g1227 387 FunFam Mitochondrial transcription termination factor-like 150 371 - -
Acco08g1227 387 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Acco08g1227 387 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Acco08g1227 387 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Acco08g1227 387 SMART mt_12 172 203 IPR003690 GO:0003690|GO:0006355
Acco08g1227 387 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Acco08g1227 387 SMART mt_12 208 238 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1227 Acco-ChrAcco08 13359807 13360970 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Acco08g1227 mTERF 2.5e-17 No_clan