Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1219 ATGTGGCAGTGCCTTCTGACTCTGAGTTGGCGTTCTTTACGGGTACGCTTTTCTTTCTTTTCAATCGGAAGGCCACTATTCTTCTTCTTGACTTCCCGCCTCTTTCCGGTTACTGCTACACCAACTCTTGGTTCTATCCTTCTTTCATGCAATGAGCAATGTGTTCATCCGTTTTGTGACTGTGCTTTTAGAATCGGGAGGAGGTTGCTCAATTATTCAATGGGCCACTTTCAGAGTGATCATATCCCCGGAAATACGTGCAATGGTTATGGTAGTTCTCATAATTTTACCGGTCGGGTTGAACGGCTACCAAGAGAAAGAGAACTAAGTGGCAAGAACAAATCAAGTGATAATAATCATGGGGGGCCTTTTAGACAACGTCTTTTGGTGGTAGCCAACAGGTTGCCTGTCTCAGCAGTTAGAACAAGTGAAGACTCGTGGTCCATGGAGATGAGTGCTGGTGGTCTTGTGAGTGCTCTCTTAGGTATCAAAGAGATTGAGGCCATTTGGATAGGTTGGGCTGGTGTCAATGTGCCGGATGAGATTGGACAGAAAACACTTACTAAAGCTTTGGCTGAAAAGAGGTGTATTCCAGTAATTCTTGATGAAGAGATTGTTCATCAATATTACAATGGTTACTGCAATAACATCTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGATCGTCTTGCCACCACAAGGAATTTCCAATCTCAGTTTGCAGCGTATAAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAAAGAACACTATCAGGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTCATGTTTCTTCCAAAATTCTTAAAGGATTATGACTTTAACATGAAAGTTGGCTGGTTTCTGCACACACCATTTCCATCTTCAGAAATTCATAGGATGCTGCCTTCTCGATCAGAGCTCCTGCATTCTGTTATTGCAGCTGATTTAGTTGCTTTTCACACCTATGATTATGCACGGCACTTTCTTAGTGCTTGCACTCGGATTCTTGGGCTGGAGGGTACACCTAAAGGGGTTGAAGATCAAGGGAGGTTGACTCGAGTTACTGCATTTCCGATTGGGATAGACTCAGAGCGATTCATACATGCTCTTGATCTTCCTGAAGTTAAGGAGAACATCAAAGAATTCGAAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGCGTTGATCGTCTTGATATGATCAAGGGAATTCCTCAGAAAATTCTGGCATTTGAAAAATTTCTGGAAGAGAATGCCTCTTGGCGTGATAAAGTAGTTTTGATTCAAATTGCTGTGCCAACGAGGACAGATGTTCTTGAATATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTGGGTCGCATTAATGGAAGATTTGGAACACTGACTACTGTTCCTGTACTTCACCTGGATCGCTCTCTTGAGTTTTATAAACTGTGTGCTTTATATGCTGTAACTGATGTAGCCCTTGTCACGTCTTTGAGGGATGGGATGAATCTAGTCAGCTATGAATATGTGGCTTGCCAAAATTCTAAGAAGGGAGTACTAATTCTCAGTGAATTTGCTGGAGCTGCACAGTCTTTAGGTGCAGGTGCAATTCTGGTTAACCCTTGGAATATCACAGAAGTCGCTGCTGCTATTGACCAGGCTCTGAACATGCCATCCGATAAAAGAGAGAAGTGGCATGCACGCAACTTTTTACATGTAAAAACTCACACTGCTCAGCAATGGGCAGAAACTCTTGTAAGTGAACTAAACCAGACTGTTTCTGAGCAAAGACGAAGGACAAGACAAATTCCAGCCACACTTCCAACCAAGGATGTGGTGGAATGTTATCTCCAGTCAACTAACCGATTGATCATTTTGGGATTCAATGGATGTTTAACGGAATCAGTGGAGAAAAGAGGTGGTCAGATTAAAGAAAGGGAACTTAAGGTGCATCCAGAATTAAAACAGCCACTGACAAAACTATGCAGCGACCCAAACACCACAGTTGTTATTCTTAGTGGAAGTGATAGAATAGTCTTAGAGGAGAATTTTAGGGAGTATAACCTGTGGTTGGCTGCGGAAAATGGTATGTTTATACACCCTGCAAAGGGAAAGTGGATGTCAACAATGCCAGAGCTTCTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTATTGAGTACTTCACCGAAAGAACACCGCGGTCACTTTTTGAAGAACGGGAAACATCAATTGTGTGGAATTACAAGTATGCAGATTTTGAATTTGGAAGACTTCAAGCAAGGGACTTGCTGCAGCATCTCTGGACGGGTCCTATCTCTAACGCACCAGTCGATGTTATTCATGGTAGCTGGTCTGTTGAAGTACGCGCTGTCGGTATAACAAAGGGAGCAGCTATGGACCGCATCCTAGGTCACATAGTACACCGCAAATCATCTGTGACATCACCATTTGATTATGTTCTATGTGTAGGACATTTTCTGGCAAAGGATGAAGATGTTTTTACCTTTTTTGAGCCAGTATTTCCTTCTATTGATTTGGCTCTTCCACGAGCAAAGGAGACAGATATAGATGAGTTTTGTGCTGACAAGAGATTTCCTTTGAAGAATAGAACCAGTAAAAGTGGACCAAAGGCATCAAAAAATAATGTTCAAATGCCAAAGTCAAATTCTGAGATGTGTAATGCACCTTGGATTCCAACTCTTGGAACTGAAACAATTTCATGGGATATCCTAAACCTTAAGAAGGAGAATTACTTCTCTTGTGCTGTCGGACGGACTCAATCGAGTGCTCAGTATACGCTTGGATCATCATCAGATGACGTTGTTGCTTTTCTGGAGAAACTGGCTGCTGCTGCGTCATCTCCAAACTCTTCTAGTTAA 2889 0.4219 MWQCLLTLSWRSLRVRFSFFSIGRPLFFFLTSRLFPVTATPTLGSILLSCNEQCVHPFCDCAFRIGRRLLNYSMGHFQSDHIPGNTCNGYGSSHNFTGRVERLPRERELSGKNKSSDNNHGGPFRQRLLVVANRLPVSAVRTSEDSWSMEMSAGGLVSALLGIKEIEAIWIGWAGVNVPDEIGQKTLTKALAEKRCIPVILDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRNFQSQFAAYKKANQMFADVVKEHYQEGDVVWCHDYHLMFLPKFLKDYDFNMKVGWFLHTPFPSSEIHRMLPSRSELLHSVIAADLVAFHTYDYARHFLSACTRILGLEGTPKGVEDQGRLTRVTAFPIGIDSERFIHALDLPEVKENIKEFEERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENASWRDKVVLIQIAVPTRTDVLEYQKLTSQVHEIVGRINGRFGTLTTVPVLHLDRSLEFYKLCALYAVTDVALVTSLRDGMNLVSYEYVACQNSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIDQALNMPSDKREKWHARNFLHVKTHTAQQWAETLVSELNQTVSEQRRRTRQIPATLPTKDVVECYLQSTNRLIILGFNGCLTESVEKRGGQIKERELKVHPELKQPLTKLCSDPNTTVVILSGSDRIVLEENFREYNLWLAAENGMFIHPAKGKWMSTMPELLNMEWVDSVKHVIEYFTERTPRSLFEERETSIVWNYKYADFEFGRLQARDLLQHLWTGPISNAPVDVIHGSWSVEVRAVGITKGAAMDRILGHIVHRKSSVTSPFDYVLCVGHFLAKDEDVFTFFEPVFPSIDLALPRAKETDIDEFCADKRFPLKNRTSKSGPKASKNNVQMPKSNSEMCNAPWIPTLGTETISWDILNLKKENYFSCAVGRTQSSAQYTLGSSSDDVVAFLEKLAAAASSPNSSS 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1219 962 Gene3D - 647 808 IPR023214 -
Acco08g1219 962 MobiDBLite consensus disorder prediction 875 892 - -
Acco08g1219 962 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 114 953 IPR001830 GO:0003824|GO:0005992
Acco08g1219 962 CDD GT20_TPS 127 592 IPR001830 GO:0003824|GO:0005992
Acco08g1219 962 MobiDBLite consensus disorder prediction 870 892 - -
Acco08g1219 962 Gene3D Glycogen Phosphorylase B; 119 373 - -
Acco08g1219 962 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 119 373 - -
Acco08g1219 962 CDD HAD_TPP 625 843 - -
Acco08g1219 962 Gene3D - 714 794 - -
Acco08g1219 962 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 714 794 - -
Acco08g1219 962 Pfam Trehalose-phosphatase 648 842 IPR003337 GO:0003824|GO:0005992
Acco08g1219 962 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 374 577 - -
Acco08g1219 962 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 127 593 IPR012766 GO:0003825|GO:0005992
Acco08g1219 962 SUPERFAMILY HAD-like 624 952 IPR036412 -
Acco08g1219 962 Gene3D Glycogen Phosphorylase B; 374 577 - -
Acco08g1219 962 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 126 594 - -
Acco08g1219 962 Pfam Glycosyltransferase family 20 127 592 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1219 Acco-ChrAcco08 13247451 13260789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1219 82 958 Trehalose Biosynthesis Gene Families AT1G78580 68.671 0.0 1285