Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1214 ATGTCATCATCTTCCTCCTACGAGCTTGTCCTTACCAGCTCTCCTGATGGCCCTATCGTCGCCTTCAATGCCTCCACTGGGGCTCCACTCACTCGCTTCCTAGGCACCCGATCACCCCGCCGCGGCATCACGGCCGCTGGAAACAGCTTCATCGCCGCGTCTCACGTGTCACCAGACACAGCCGCAGTGTCCATTCACCTCTACAACTGGCACACTTCAAGCGTTCTTCACAGATTCCCCGCGCCCGAGTTTGTCGCCCCACTTGCCGCCACTCCAGACGGCGGCTTTATCTTTGCCGGAGGCCAGTCCGGAAGCATCCATTGTTTCTCAGTTCCTTTAGGGGATGTGGTCAAGTCTTTTCCTGCCCACACAAAACCCATTTCTTGCCTCCAACTCACTAATGATGGGTCATTAGTAATTTCAGGCAGTGATGATGGTAGCATTACGATGATCCCAACTTTTCAAATAGTAGAATCATCAGACTCAGACCCAGAATCATCAAAAGACTTGATTTTGCACCATTTAAAGAAGGCACATTCAGATTCAGTCACAGCCTTAAGCACAGGAATAGGGCTATGCAACAATTCCATGCTTGTCTCGTCCTCTTTGGACTCAACCTGCAAGTTCTGGAATCTTCTAGAAGGGACTCTCCTTCGCACAGTGACCTTCCCTTGTTCCATAAATGGAGTAGCCATAAGCTCATCAGACTCATCACAGTACTTGTTGTTCGCTGCTGGATCAGATGGGTCAGTTTACAAAGCATCAATAATGGAGGCCGTCAGAAAAACACAGAGCGGAGAAGTGGTAGTGAAGAAATGGAATAAGAAAAGCCACGTGGGGTCCACTGAAGCAGTGGTAGTGGTGAATGAAGGGAAGAATCTGGTGTCTGCGAGTGAAGATGGTAGTGTGTGGATGTGGGAGATTGAGAGAGAAGAAGTAACAAAGGTGATAAAGGATAATAATAACAGTAGTAATAGGGGAGGATTAATTATGGAAGGAACTAGTAGCATTAGTGATATGATAGTGGTTAGTGGGACCACTGATGAGCATAGAGGAGGTAGAGGGAAGAGCGATGGTGGTCGTGGCGGCGGCGGCAGGGGGTTTGTGAGTTCAGGGATGTTGTTGAAAGAAGAAGTGATGAGGTCAATGAAGAAGATAATGGAGGTGGGAGATGTATTGAGGGTGGTGGAGGAAGATGAGAGAAGAGCCATTAATATGTTGGAGTCTGCAATTGCTATGTATGAGAGGCTCTTGGAGCTCATACTTGAAGAAGCTTTAAAAGGTACTTGCGATGATGATGAGAGTGATGAAGAACAAGAGGAGGAGGAGGAGGATAAAGAAAGAGGAGAAAGAGAAGATAAGTAA 1365 0.4769 MSSSSSYELVLTSSPDGPIVAFNASTGAPLTRFLGTRSPRRGITAAGNSFIAASHVSPDTAAVSIHLYNWHTSSVLHRFPAPEFVAPLAATPDGGFIFAGGQSGSIHCFSVPLGDVVKSFPAHTKPISCLQLTNDGSLVISGSDDGSITMIPTFQIVESSDSDPESSKDLILHHLKKAHSDSVTALSTGIGLCNNSMLVSSSLDSTCKFWNLLEGTLLRTVTFPCSINGVAISSSDSSQYLLFAAGSDGSVYKASIMEAVRKTQSGEVVVKKWNKKSHVGSTEAVVVVNEGKNLVSASEDGSVWMWEIEREEVTKVIKDNNNSSNRGGLIMEGTSSISDMIVVSGTTDEHRGGRGKSDGGRGGGGRGFVSSGMLLKEEVMRSMKKIMEVGDVLRVVEEDERRAINMLESAIAMYERLLELILEEALKGTCDDDESDEEQEEEEEDKERGEREDK 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1214 454 Gene3D - 167 351 IPR015943 GO:0005515
Acco08g1214 454 MobiDBLite consensus disorder prediction 429 454 - -
Acco08g1214 454 MobiDBLite consensus disorder prediction 428 454 - -
Acco08g1214 454 ProSiteProfiles Trp-Asp (WD) repeats profile. 275 316 IPR001680 GO:0005515
Acco08g1214 454 SMART WD40_4 113 152 IPR001680 GO:0005515
Acco08g1214 454 SMART WD40_4 168 211 IPR001680 GO:0005515
Acco08g1214 454 SMART WD40_4 214 255 IPR001680 GO:0005515
Acco08g1214 454 SMART WD40_4 72 110 IPR001680 GO:0005515
Acco08g1214 454 SMART WD40_4 266 307 IPR001680 GO:0005515
Acco08g1214 454 MobiDBLite consensus disorder prediction 345 369 - -
Acco08g1214 454 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 8 312 IPR011047 -
Acco08g1214 454 Gene3D - 1 166 IPR015943 GO:0005515
Acco08g1214 454 Pfam WD domain, G-beta repeat 172 211 IPR001680 GO:0005515
Acco08g1214 454 Pfam WD domain, G-beta repeat 115 148 IPR001680 GO:0005515
Acco08g1214 454 ProSitePatterns Trp-Asp (WD) repeats signature. 198 212 IPR019775 -
Acco08g1214 454 ProSitePatterns Trp-Asp (WD) repeats signature. 294 308 IPR019775 -
Acco08g1214 454 ProSiteProfiles Trp-Asp (WD) repeats profile. 120 150 IPR001680 GO:0005515
Acco08g1214 454 ProSiteProfiles Trp-Asp (WD) repeats profile. 176 220 IPR001680 GO:0005515
Acco08g1214 454 Coils Coil 404 424 - -
Acco08g1214 454 PANTHER WD-REPEAT PROTEIN 18 8 424 IPR045227 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1214 97 310 U-box Gene Family AT1G04510 25.112 8.80e-08 52.4