Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1198 ATGAAGAGCAGAAGCATGAAGATAACTTTCCTCTTTCTCCTCATCTCTATTTTCTGGGCTTCCTCTGCATCTGGAGCCACCAAAATAGATCCATCTGAAATGAGAGCTCTGAGAAGCATAGCGAAGACGCTGGGAAAGGAAGATTGGAACTTCAGTGTAGATCCATGCGATACTGATCCCTTTGCTAACTCCACCTGGTATAATCCGTTCCCTGTCGACACATTTAGTCGAAACGCTGTCGTATGCAACTGCTCCATTGCCAATGACGACTTCTGTCATGTGGTCAACATAACCCTGAAGAAGCAAAGTCTCCGGGGAAAACTCCCGCCAGAACTCGACAGATTGCCTTACCTTTCCGTAATCGACCTGAGCCGCAACTACCTTAGCGGTTCAATCCCTTCAAGTTGGGCTTCCATTCCACTTCAGCTCATTTCTGTTCTTGGTAACCGAATAACGGGTGAAATCCCTGTGGAGCTAACGAAGATCACTACTCTGCAACGTTTGGTCCTCGAGTTCAATCAGTTTTCTGGAAATCTTCCTCCTGAGCTTGACAATCTTCTCCAACTTACAGGACTGCTTCTTACCTCCAACAACTTCACTGGGGAAATACCTCCAACTTTCGCAAAGCTTACTAATTTGGCGGATGTTCGATTAGGTGACAATCGGTTCTCTGGAAAGATACCTAACTTTATTCAGAACTGGAAAAGTCTTGAGATAATGATGATTCATGGGAGTAGTTTCAGTGGACCGATTTCTGAAATTTCATTTCCTGAAACAATGACGGACTTGAGGATAAGTGAGTTAAATGGACCTGATTCAGCATTTCCTGCGCTCAATAACTTGACAAAATTGAAAACATTGATATTGAGGAGTTGCAATATCAATGGACCAATGCCACAGTATCTTTGGAAAATGGGAGATTTAAAAACCTTAGACCTGAGCTTTAACAAATTGCAAGGAAAAATTCCGGATAACCTTGCTCACCTATCACAATTGCATGACATATATTTAACTGGAAACCTTCTCTCTGGACATGTGCCTACGTTGGACAAACCTGAAAACTTTGATGTTTCATATAACAACTTTAACAACACAAACACAGGGGAGGAGAAGTGTGGTTACCCGAAACTGAACCTGTTTGGAGACCCTTTGATGGCCAATGATTCCTTCCCACTTTTTTTCAGAGGATCTGTTACTTGTATGAGAGGCACTTGTTCTAAAACCTGGTACTCCGTCAATATAAATTGTGGTGGAAGTCAGGAAACCGTTGGAGATACAGTGTATGATGCTGATATGAATACAGCTAACCAAGGATTTGCAAAGAGTACAACTAACTGGGCAATTAGCAGTACTGGTCAGTTTTTAGATGCAAAACAAAGCGATATATTTTACAAAGAAAACGACGGTTTCCCTGTGGCCCCTGTTAAACTGTACGGGAATGCGCATCTTTCCCCTCTTTCTCTGACCTATTATGCATTTTGCCTGGCAAATGGACAATACACGGTGAGGCTCCATTTTGTGGAGATAATGTTCACTGACGATCAAACATTTGGAAGCCTTGGAAGGCGTGTGTTTGATGTCTACATTCAGGAACAGCAGATGCTGAAGGATTTCAATATTGTAAATGAAGCAGGGGGAGTTGGGACAACTGCTATACCACAAAAGTCAGTTTATGGCCCTCTAATTTCAGCTATCTCTATAACTTCTGACTTTAAACCCCCAAGAAGCATCCCTGGAGCAGTTGTGGCTGCAATTGTGGCTGCGGGAGTGAGCATTGTCATCCTGATATTGGGCTTACTCTGGTGGAGAGGTGCCCTAGGAAAAAGAAGTTTATTAGCTATAGAGCTAAAGAGCTTAGATCTGCAAACTGGTCTATTTACCTTGCGCCAAATCAAAGGAGCAACAAATAACTTTGATGCATCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTTTACAAGGGCTTTCTATCAGATGGCACAATGATAGCAGTGAAGCAACTTTCTTCTAAATCAAACCAAGGAAACCGTGAGTTTATCAATGAGATAGGCATGATCTCTGCTTTGCAACACCCTTCTCTTGTTAAGCTCTACGGCTGTTGTGTTGAGGGGGATCAGTTGTTGTTGGTATATGAATACATGGAAAACAATAGCCTTGCTCGTGCCTTGTTTGGACCAGAGGAATTCCGTGTAAAATTGGATTGGCCAACGAGACAGAAGATTTGTGTTCATATTGCCCGAGGTTTGGCTTTCCTTCATGAAGAATCGAGACTAAAGATTGTTCATCGGGACATCAAGGCCACTAATGTGCTACTTGACAAGGACCTGAATGCAAAAATATCAGATTTTGGGCTAGCGAAGCTCAATGAAGAGGAAAATACCCACATAAGCACTCGAATTGCTGGGACCTATGGATACATGGCACCTGAGTATGCAATGCATGGGTATTTGACCGACAAAGCAGATGTCTATAGTTTTGGAATTGTTACTTTGGAAATTGTAAGTGGAAGGAGTAACACTTTTCGCAGACAAAACGAAGACTGCTTCAATCTTCTTAATTGGGCACATGTTTTGAAAGAGAATGGCTATCTGATGGAGCTAGTTGATTCAAGGCTGGGTTCAGAATTTGACAGAGAGGAGGTAATGGTGATGATCAATGTGGCTCTCCTATGCACCCATCCATCTTCATCACTCAGGCCCGCCATGTCTTCAGTACTAAGCATGCTCGAAGGAAGAACTGTAGTTCCAGAATTCGTTTCTGATCAAAGTGAGGGAGCAAGTAAGATGAAGCTGGAAGCAATGAGACAGTATTACAGAGAGTTAGAAGGAAATCAGAAGAATGATGAGACTGAAACTCATTCCAAGAGTCTCTTAGGGGTGTCCACTTCTTCATCCACATCAGCCAGAGATCTCTACCCTGTTCGCCTAGATTCTTCCTACTTCGAGCAAAGAAAATCTTAA 2961 0.4265 MKSRSMKITFLFLLISIFWASSASGATKIDPSEMRALRSIAKTLGKEDWNFSVDPCDTDPFANSTWYNPFPVDTFSRNAVVCNCSIANDDFCHVVNITLKKQSLRGKLPPELDRLPYLSVIDLSRNYLSGSIPSSWASIPLQLISVLGNRITGEIPVELTKITTLQRLVLEFNQFSGNLPPELDNLLQLTGLLLTSNNFTGEIPPTFAKLTNLADVRLGDNRFSGKIPNFIQNWKSLEIMMIHGSSFSGPISEISFPETMTDLRISELNGPDSAFPALNNLTKLKTLILRSCNINGPMPQYLWKMGDLKTLDLSFNKLQGKIPDNLAHLSQLHDIYLTGNLLSGHVPTLDKPENFDVSYNNFNNTNTGEEKCGYPKLNLFGDPLMANDSFPLFFRGSVTCMRGTCSKTWYSVNINCGGSQETVGDTVYDADMNTANQGFAKSTTNWAISSTGQFLDAKQSDIFYKENDGFPVAPVKLYGNAHLSPLSLTYYAFCLANGQYTVRLHFVEIMFTDDQTFGSLGRRVFDVYIQEQQMLKDFNIVNEAGGVGTTAIPQKSVYGPLISAISITSDFKPPRSIPGAVVAAIVAAGVSIVILILGLLWWRGALGKRSLLAIELKSLDLQTGLFTLRQIKGATNNFDASNKIGEGGFGPVYKGFLSDGTMIAVKQLSSKSNQGNREFINEIGMISALQHPSLVKLYGCCVEGDQLLLVYEYMENNSLARALFGPEEFRVKLDWPTRQKICVHIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLNEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVTLEIVSGRSNTFRRQNEDCFNLLNWAHVLKENGYLMELVDSRLGSEFDREEVMVMINVALLCTHPSSSLRPAMSSVLSMLEGRTVVPEFVSDQSEGASKMKLEAMRQYYRELEGNQKNDETETHSKSLLGVSTSSSTSARDLYPVRLDSSYFEQRKS 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1198 986 MobiDBLite consensus disorder prediction 943 967 - -
Acco08g1198 986 FunFam Putative LRR receptor-like serine/threonine-protein kinase 714 921 - -
Acco08g1198 986 CDD STKc_IRAK 644 911 - -
Acco08g1198 986 Pfam Leucine rich repeat 283 342 IPR001611 GO:0005515
Acco08g1198 986 Gene3D - 409 571 - -
Acco08g1198 986 ProSiteProfiles Leucine-rich repeat profile. 307 330 IPR001611 GO:0005515
Acco08g1198 986 SUPERFAMILY Protein kinase-like (PK-like) 621 916 IPR011009 -
Acco08g1198 986 SUPERFAMILY L domain-like 83 347 - -
Acco08g1198 986 ProSiteProfiles Protein kinase domain profile. 638 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1198 986 Pfam Protein tyrosine and serine/threonine kinase 641 859 IPR001245 GO:0004672|GO:0006468
Acco08g1198 986 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 607 713 - -
Acco08g1198 986 Gene3D Transferase(Phosphotransferase) domain 1 714 923 - -
Acco08g1198 986 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 940 - -
Acco08g1198 986 Gene3D Phosphorylase Kinase; domain 1 607 713 - -
Acco08g1198 986 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 35 203 - -
Acco08g1198 986 SMART serkin_6 638 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1198 986 Gene3D Ribonuclease Inhibitor 78 377 IPR032675 -
Acco08g1198 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 760 772 IPR008271 GO:0004672|GO:0006468
Acco08g1198 986 Pfam Malectin domain 411 552 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1198 Acco-ChrAcco08 12884483 12900294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1198 17 938 Receptor kinase-like Gene Family AT1G53420 50.312 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g1198 PK_Tyr_Ser-Thr 2.1e-47 CL0016