Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1189 ATGGAGTTTGGAATTTCAAGCTCTAAGCTTTTCTACCCCTTCATATTTGGATGCTTCGCTTTGAATGCTTTCATGGACCATGAATCCAATGCTCAACACATTCCAGAAGATGAAGTGATTTGTCTAACAATTATCTCAATGGATCAATCCCGAGGAGCTTTGCTAGACTCCCTCTTGTTACATTACCTTTCGAGTAACCCAATCTCTGGTCCAATTCCAAAGGAAATTGGTGAAATTACAACTTTGGAGGTGTTATATTTGAGAGATAATCTGCTAGAAGGACCTCTTCCTTCTAGTCTTGGAAAATTGAAGGAATTACGCCAACTGGTTCTTTCTGGAAATAACGTCTCTGGGACAATACCCGAAAGTTTTGGCAACATGAAGAAACTAATTAATATTGCATTAGATGGGACCAAGATAGGAGGGAAATTGCCCAATTTTATTGGGAATTGGACCGAACTTTATAGCATGTATTTAAAGGGAACATCTATGGAAGGCCCCATTCCTACAACCATATCTCAATTAACAAAATTGGAAATATTGATCATATCTGATTTGCATGGACCTGCGACGATGAGATTTCCTAATCTGGAAAAGTTGACATCATTAACATACTTGATGTTGAGAAATTGCTCCATCCATGATTCCATTCCAAATTATATTGGTAAAATGAAAGGCTTATATTTTCTAGATTTGAGCTTCAACAAGTTGACCGATCAAATCCCAAACAATATAAGTGACTTGAACAATCTTCAGTACATGTTTCTAACTGAAAATTCTCTCGGTGGAAAAATTCCTGAATGGATACTGCAAGAAAAATATCATTTTGATCTATCTTACAACAATTTTTCGGAGACAGATGCACTTGTTTGTCAGCGCAATAATGTGCCTACCTGCTTAAAAAGGGGCCTTCCTTGTGGAGGAAAACCTAAGCGCGTATTTGATGTTTCAATTCAAGGTAGGAAATATTTGCTTGACTTCAACATTATGAAGGAAGCTGGTGGCATTGGTAAGGGCATCCATAAAGACTTTAACGTAGATGTCAATGATAACACCTTGGAGATTCATTTGTACTGGGCTGGGAAAGGAACTATCACTCTTCCTTATTATGGTGTATATGGACTTCTTATATCTGCTATTTCAGTCACACCAAACTTCAAAATTCCTGGGATTTCTGCGGGAGCCATTACTGGAATTGTGGTTGGATCATGTGTGTTCCTCATCATTCCAATAGTATTCATTCTTCGAAAGATGGGTTTTGTAGGTGGCAAAGATTCAAAAGATAAACAATTTTTAGATCTAAAAACGGGTTATTTTTCTTTAAAACAAATCAAAGAGGCCACCAACAACTTTGCCGCAGAAAATAAGATTGGTGAAGGAGGTTTTGGACCGGTATACAAGGGTGTACTATCAGATGGTGTTGTCATAGCTGTGAAGCAGCTTTCCTCCAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAGTTGGAATGATATCTGCTTTGCAACACCCAAACCTTGTAAAGCTTTATGGTTGTTGCGTTGAAGGAAATCAGTTGTTGCTTATATATGAGTACATGCATAACAACAGTCTTGCTGGTGCTCTTTTTGGTGGCCAACGACGAAAGATACCCTTGAACTGGCCTACAAGAATGAAAATATGTGTAGGTATAGCAAGAGGGTTAGCTTATCTTCATGAGGAATCAAGGTTGAAAATTGTGCATAGGGATATTAAGGCATCAAATGTCTTACTTGATAAAGATTTGAATGCCAAGATCTCAGACTTTGGCTTAGCTAAGCTTGACGAAGATGAGAATACTCATATTAGCACAAGAATAGCTGGAACAATTGGTTATATGGCTCCTGAATATGCAATGCGAGGATACTTGACTGATAAAGCAGATGTTTACAGCTTTGGCGTTGTTGCTTTAGAAATTGTTAGCGGAAAAAGCAATGCAAGTTATAGGCCAAAAGAGGAGTTTGTTTATCTTCTTGATTGGGAGATGGAGAAGGAGGCGGCAAGGGTGGTTGAGGAAGAGAATGGAAGCAGCAGCGAGGACAGGCAGCTTTTAGAGAGTATGGCTGTCTTGGATTTTGATGTGCTCTATTTCACGATGGCCTTGCAAACTAATGACAACAAATGGGGGAAGCTTGGTGATGTTAGAGACAAAGAAGAGTTTACAAAATTTGGTGGGGTCTTCATGGGAAGTTGA 2214 0.3866 MEFGISSSKLFYPFIFGCFALNAFMDHESNAQHIPEDEVICLTIISMDQSRGALLDSLLLHYLSSNPISGPIPKEIGEITTLEVLYLRDNLLEGPLPSSLGKLKELRQLVLSGNNVSGTIPESFGNMKKLINIALDGTKIGGKLPNFIGNWTELYSMYLKGTSMEGPIPTTISQLTKLEILIISDLHGPATMRFPNLEKLTSLTYLMLRNCSIHDSIPNYIGKMKGLYFLDLSFNKLTDQIPNNISDLNNLQYMFLTENSLGGKIPEWILQEKYHFDLSYNNFSETDALVCQRNNVPTCLKRGLPCGGKPKRVFDVSIQGRKYLLDFNIMKEAGGIGKGIHKDFNVDVNDNTLEIHLYWAGKGTITLPYYGVYGLLISAISVTPNFKIPGISAGAITGIVVGSCVFLIIPIVFILRKMGFVGGKDSKDKQFLDLKTGYFSLKQIKEATNNFAAENKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFVNEVGMISALQHPNLVKLYGCCVEGNQLLLIYEYMHNNSLAGALFGGQRRKIPLNWPTRMKICVGIARGLAYLHEESRLKIVHRDIKASNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNASYRPKEEFVYLLDWEMEKEAARVVEEENGSSSEDRQLLESMAVLDFDVLYFTMALQTNDNKWGKLGDVRDKEEFTKFGGVFMGS 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1189 737 Gene3D Transferase(Phosphotransferase) domain 1 527 700 - -
Acco08g1189 737 Gene3D Phosphorylase Kinase; domain 1 421 526 - -
Acco08g1189 737 SUPERFAMILY Protein kinase-like (PK-like) 435 664 IPR011009 -
Acco08g1189 737 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 422 526 - -
Acco08g1189 737 SUPERFAMILY L domain-like 60 285 - -
Acco08g1189 737 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 53 140 - -
Acco08g1189 737 FunFam Lectin-domain containing receptor kinase A4.3 527 697 - -
Acco08g1189 737 Gene3D - 270 385 - -
Acco08g1189 737 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 311 680 - -
Acco08g1189 737 Gene3D Ribonuclease Inhibitor 190 248 IPR032675 -
Acco08g1189 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 573 585 IPR008271 GO:0004672|GO:0006468
Acco08g1189 737 SMART serkin_6 451 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1189 737 Pfam Malectin domain 309 380 IPR021720 -
Acco08g1189 737 ProSiteProfiles Protein kinase domain profile. 451 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1189 737 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 194 286 - -
Acco08g1189 737 Pfam Protein tyrosine and serine/threonine kinase 454 665 IPR001245 GO:0004672|GO:0006468
Acco08g1189 737 CDD STKc_IRAK 457 678 - -
Acco08g1189 737 Gene3D Ribonuclease Inhibitor 36 189 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1189 Acco-ChrAcco08 12546226 12558669 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1189 55 667 Receptor kinase-like Gene Family AT1G53430 48.958 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g1189 PK_Tyr_Ser-Thr 1.2e-48 CL0016