Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1187 ATGAGAAGAGGCGGATACCCATATGGTGGTCCCGGTGGCTACAGGGGAGAGCCAAGTGGCCGGAATGCTGGGAGATCAGGTGGAGGACCACCGCGAGGTGGTGGTGGAAGAGGCTACCATCACCCACCGCAGCCTCACAATGACCCTTCTTGGGGCGAGGACACGAGGAGAGGGAGATACAGAGATGGTGCTGGACCTGTTTGGGAAGCCGGGGGTTCAGTTCATTCTCGTGATTCTCCTACTGATCCAGTTCCTAAACGACGCCAAATTTCACAACCTCTTCCAAACATATGTCATACTCCAGAGACAAAAGATAAGCTTTTACCAGTACATAGGCCTGACAGGGGTGGGACATTAGCAGCTCGAACTTGCAACCTTCGTGTCAATCACTTTCCCATCACATTCAGGCCTGATACTATACTGATGCATTACAATGTTGACGTGAAGCTCATTTCGCCTATCAGACAAGGTGGATCTCAAAGAATATCAAAGTCTGACCTCTCTATAATTAGGGAGACATTGTTTTCTAGTGACACTAGGTTGCCATTGGAGAAAACAGTGTATGATGGAGAAAAGAATATCCTCAGTGCAGTTCCTTTGCCAGAAGAATCCTTCACGGTTACTATCTCAGCTGGAGAGGATGAAAGAAGCTATTCATTTATGGTCACCTTAACACTCGTTAACAAGCTTGAGTATCGCAAGTTGAGGCAATACCTCAATAAGGAGCTTATGTCAGTTCCAAGAGACATTTTGCAAGGGATGGATATAGTGTTGAAGGAAAATCCAGCCAAGCGTACGATCTCTATGGGACATAGTTTCTATCCTTCGTATCGTCCTATGTTCCATCAGGATTTTCGCAATGGTGTAATTGCATTGGGAGGATTTCAGCACAGTTTGAAGCCTACATCTCAGGGATTGTCCTTATGCCTTGACTATTCAGTTGTATCGTTTCGAAAGCCAATGTCAGTCTTGGATTTTCTTTTTGAGCGCATTGATGGCTTTAGATTGGAAGGATTTGGGCATTTCAGGAATCAAGTTAAGACAGAATTGATTGGGTTAAAGGTAAATGTGACACATCGCAGAACCAAACAGAAATTCACCATTGTAAGGTTATCAGACCATAACACAAGGGATATCACCTTTACTTTTGTTGACCAGGAGGGCCGTTGTGACCCATATGAAGTCAACATTGTTGACTATTTTTGGCATAAATACCAAAAGAACATTGTACACAAAGATATTCCTTGTTTAGAATTTGGGAGACGTGTCTATGTGCCAATGGAGTTTTGCATCTTAGTTGAGGGTCAGAGATTTCCCAAAGAGAATTTGAATAAAAATGCTTCCATGACTTTGAAAAATATGTCATTGGCCCCTCCAAAGGTGAGACTGAGTGCCATACAAGCAATGGTGGAGTCAAGTGACGGACCTTGCGGTGGTGATATCATTCAAAATTTTGGGATGCAAGTCAACACAAACATGACTAGTGTTTTAGGACGCATTATTGAGCCACCAAAATTGATAGTAGGTGGTCGACATGGCGAGATAATGACAGTAACATTGGATCCACAGAAATGCCATTGGAATCTGGTTGGAAAATCTGTGATGAAAGGCAAACCAATTGAGCATTGGGGCATTATTGATTTTACAAGCTCAGAGTCAGATTTCCGGTTCAAATTAAGATGCAAGGAGTTCATTTACAAGCTGAAGGACAAATTTAGAAGTTTGGGCATCTACATGAATGATCCTCTTTGGGTTGAACAATCTTCGATGCATCAACTTGCAAGTCATGGTTCGCTCTCTGCATTACTTAAGAAAGTGAATGATTGGCATCAAGTGCAATTTATTCTGTGTGTGATGTCTCAAAAACATGTCGGGTATAAGACTCTCAAGTGGATTTCAGAGACAAAGGTTGGTGTAGTGACACAATGTTGTTTAGCTGGTACTGTGAATACAGGGAAAGATCAGAATTTTACAAATCTTGCTCTCAAGATTAACGCCAAACTTGGAGGTAGTAATGTTGAGCTTGAGAATAATAGGCTCCCTTACTTTGCAGGTGATAGGCATGTCATGTTTATAGGGGCAGATGTCAATCATCCTCCTGCTCGAGACATTAATAGTCTATCAATTGCTGCAGTGGTTGGAACTGTCAATTGGCCTGCTGCAAATCAGTACGCAGCACGTGTTAGCCCTCAATCCTGTAGGAAAGAACAAATATTGAATTTTGGAACAATTTGCCTTGAGCTTGTGGACTGTTACAGAAGGTTGAACAAAGTGAGACCAGAAAAAATTGTTATTTTTCGTGATGGGGTGAGTGAGGGCCAGTTTGACATGGCTCTTAATGAAGAGCTACGAGATGTGAAATGTGTTTTCCAAAATCAGAACTATTTTCCAACTATAACTTTGATTGTAGCACAGAAGCGACATCAGACTCGGTTGTTTCATGAGCAGGCTTCGGCTGGTAATGTGTCTCCGGGAACGGTGGTGGACACAAAAGTGGTACATCCTTTTGAGTTTGACTTTTACCTTTGCAGTCACTATGGAAACTTAGGAACAAGCAAGCCAACTCATTATCATGTTTTGTGGGATGAGCACAGGTTTACCTCTGATGAGTTACAGAAACTTATCTATGATATGTGTTTTACCTTTGTGAGGTGCACTAAACCTATATCTTTGGTCCCTCCTGTGTATTATGCCGACCTTGTTGCCTATCGAGGACGACTATACTATGAAGCCAAGACTGAGTTGGATCCTTCATCTGCAAATGAACACAAGTATTTCAAGCTACATGAGCACCTGGAAGACATGATGTTCTTTGTGTAA 2820 0.4241 MRRGGYPYGGPGGYRGEPSGRNAGRSGGGPPRGGGGRGYHHPPQPHNDPSWGEDTRRGRYRDGAGPVWEAGGSVHSRDSPTDPVPKRRQISQPLPNICHTPETKDKLLPVHRPDRGGTLAARTCNLRVNHFPITFRPDTILMHYNVDVKLISPIRQGGSQRISKSDLSIIRETLFSSDTRLPLEKTVYDGEKNILSAVPLPEESFTVTISAGEDERSYSFMVTLTLVNKLEYRKLRQYLNKELMSVPRDILQGMDIVLKENPAKRTISMGHSFYPSYRPMFHQDFRNGVIALGGFQHSLKPTSQGLSLCLDYSVVSFRKPMSVLDFLFERIDGFRLEGFGHFRNQVKTELIGLKVNVTHRRTKQKFTIVRLSDHNTRDITFTFVDQEGRCDPYEVNIVDYFWHKYQKNIVHKDIPCLEFGRRVYVPMEFCILVEGQRFPKENLNKNASMTLKNMSLAPPKVRLSAIQAMVESSDGPCGGDIIQNFGMQVNTNMTSVLGRIIEPPKLIVGGRHGEIMTVTLDPQKCHWNLVGKSVMKGKPIEHWGIIDFTSSESDFRFKLRCKEFIYKLKDKFRSLGIYMNDPLWVEQSSMHQLASHGSLSALLKKVNDWHQVQFILCVMSQKHVGYKTLKWISETKVGVVTQCCLAGTVNTGKDQNFTNLALKINAKLGGSNVELENNRLPYFAGDRHVMFIGADVNHPPARDINSLSIAAVVGTVNWPAANQYAARVSPQSCRKEQILNFGTICLELVDCYRRLNKVRPEKIVIFRDGVSEGQFDMALNEELRDVKCVFQNQNYFPTITLIVAQKRHQTRLFHEQASAGNVSPGTVVDTKVVHPFEFDFYLCSHYGNLGTSKPTHYHVLWDEHRFTSDELQKLIYDMCFTFVRCTKPISLVPPVYYADLVAYRGRLYYEAKTELDPSSANEHKYFKLHEHLEDMMFFV 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1187 939 SMART PAZ_2_a_3 321 457 IPR003100 GO:0005515
Acco08g1187 939 CDD PAZ_argonaute_like 320 433 - -
Acco08g1187 939 MobiDBLite consensus disorder prediction 1 111 - -
Acco08g1187 939 Pfam Piwi domain 615 909 IPR003165 GO:0003676
Acco08g1187 939 SMART DUF1785_2 267 320 IPR014811 -
Acco08g1187 939 Gene3D paz domain 315 438 - -
Acco08g1187 939 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 121 913 - -
Acco08g1187 939 SMART Piwi_a_2 614 910 IPR003165 GO:0003676
Acco08g1187 939 Pfam PAZ domain 341 447 IPR003100 GO:0005515
Acco08g1187 939 Pfam N-terminal domain of argonaute 122 258 IPR032474 -
Acco08g1187 939 Pfam Argonaute linker 1 domain 269 319 IPR014811 -
Acco08g1187 939 SUPERFAMILY Ribonuclease H-like 610 910 IPR012337 -
Acco08g1187 939 ProSiteProfiles PAZ domain profile. 346 434 IPR003100 GO:0005515
Acco08g1187 939 SUPERFAMILY PAZ domain 317 471 IPR036085 GO:0005515
Acco08g1187 939 Gene3D - 500 677 - -
Acco08g1187 939 CDD Piwi_ago-like 481 909 IPR045246 -
Acco08g1187 939 Gene3D - 683 939 IPR036397 GO:0003676
Acco08g1187 939 ProSiteProfiles Piwi domain profile. 614 910 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1187 Acco-ChrAcco08 12422796 12426566 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1187 89 921 Eukaryotic Initiation Factors Gene Family AT1G48410 34.424 4.74e-136 432