Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1182 ATGGCTGCCTCCCTTCTCAGGTTGTCCACCTTCATTGCTTTCCTCTGCATTGCCCTTCTGCTTTCCTCTCCCAACGAGAATAATGTTGAAGCAGCACTTTGTAGAAGACTAAGTGGAAAATTTTCAGGGATTTGCTTCGAAAGTGTTAACTGTGATGACATGTGCCACAGCGAGGGTGCTGTCTCGGGAAGTTGCAACGCCTATCGTTTTTCATTTGCTTGCTTCTGCTTTTACAATTGTTAA 243 0.4486 MAASLLRLSTFIAFLCIALLLSSPNENNVEAALCRRLSGKFSGICFESVNCDDMCHSEGAVSGSCNAYRFSFACFCFYNC 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1182 80 SUPERFAMILY Scorpion toxin-like 32 80 IPR036574 -
Acco08g1182 80 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Acco08g1182 80 Gene3D - 30 80 IPR036574 -
Acco08g1182 80 Pfam Gamma-thionin family 33 80 - -
Acco08g1182 80 SMART gth_4 33 80 IPR003614 GO:0006952
Acco08g1182 80 PANTHER DEFENSIN-LIKE PROTEIN 1 10 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1182 Acco-ChrAcco08 12296179 12297110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1182 6 80 Plant Defensins Gene Families AT2G02120 34.667 6.13e-11 51.2