Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1147 ATGGGAAGGAGAAATGGAGGAAGGTCACTGCATGAAATTCTTCGTCGTCGCCTTGAGTCCTGCAAATCCAGGTATTCAACTGTTGATGAAATTGTAAACCATCTTCGTGCAAATTACCCTGATTACCAGCGAACAAAACAACAAACTTTGACTCGATTTGTTCAAGAAGCTTTGGAGTCATCTAAGCGTGGGAACAAGCAATTGAACAGAAAGCCCAATACTCTCATATTTAAGCCTGACGGTTCAGAAGATAATGATGAAGATGAAGAAGAAGAAGCAGGTCGAAGTGCATCGCGAAAGAGGCGCAAGAAAGTTGATGAAAGTGAAGAGATATTGCAAAAAGCGGAGATTTTACGCCTTCAAAGGTTACAAAGGGATCGGAGCCGTCGTTTATCAACCTCTTCTTCCTCAACTTCTAATCCGTCGTCGTCATCAGAGTCTGAAGAGAGTGATGGCGAAGATGGGACTGTGTCTACATCAGAGGATGCAATTTATGGGGAGAAAGTGGAACCAGCCTTTGACTTGATGAAAACAATGTTGCGGGCTTCATACTCAGGAACAAAGAATGTGAAATCTACTGCAGAGGAGAAAAACGTTGAACTGGAGGTGACTAATAATAACAAGGCAACTAAGATTGATGCTATGGATGGGGTTGGAGGTAACATGAAGGATGGTTTGGAGCCAAAAAGGCAATTGAGAGGTTCAGTTTCGAATGGCAATGGTGATGTTGAAGTCAAGGGGAAGGGTGGCCCTAGATTCAAAGATTTGGGTGGGATGGAGAAGGTGCTGGAGGAATTGAAGATGGAAGTCATTGTTCCTCTTTATCATCCACAGTTGCCAAGAAAGTTAGGAGTGAGACCAATGGCAGGGATTTTGTTACATGGACCCCCAGGGTGTGGGAAAACCACTCTGGCTCTTGCTATAGCTAATGAGACTGGTTTTCCGTTCTATCAGATATCAGCTACAGAAGTGGTTTCCGGAGTTTCAGGAGCGTCTGAAGAAAACATTAGGGAGCTTTTTTCTAAAGCATATAAGAGTGCCCCATCAATTGTCTTCATTGATGAGATTGATGCAATTGCTTCAAAAAGAGAGAATTTACAACGTGAGATGGAGAAACGAATTGTGACACAATTGCTGACTTCAATGGATCAATCGAGCAGGCTCTTACAACCATCTGGTAGTTCAGAAAGTTCTGATGCTCATCCCGGCTATATTCTTGTCATCGGAGCTACAAATAGGCCTGATGCTGTTGACCCTGCCTTGAGAAGGCCTGGGCGATTTGACCGTGAAATTTTTCTTGGTGTTCCTGATGAATATGCTAGGGAAGAGATCTTGTCTGTGCTTACTCGCAATCTAACTATGGAGGGCTCATTTGATCTTAGAAAAATAGCTAGGTCTACCCCAGGTTTTGTTGGAGCAGATTTGGCAGCTCTAGCTGACAAGGCTGGTAACCTAGCCATGAAAAGAATTATTCATGAAAGGAAACGTGAATTATCCCAAGATCTTTTAGATGACCATGGTGAAGACTGGTGGAGGGAACCTTGGTTACCAGAAGAGATGGATAAGCTTGTCATCAAAATGTCAGATTTCGAGGAAGCAGTCAAATTGGTTCAACCTTCATCAAAAAGAGAAGGGTTTTCTTCAATCCCTAATGTAAAATGGGAAGATATTGGTGGGCTTGATCTTCTAAGACAAGAGTTTGAGCGTTATATTGTTAGACGCATAAAATATCCAGATGATTATAAGGAATTTGGGGTGGATCTTGAGACGGGATTTTTGCTTTATGGACCACCAGGGTGTGGTAAAACACTGATTGCTAAAGCTGTTGCCAATGAGGCAGGAGCTAATTTTATTCATATCCAGGGCCCTGAACTTCTAAATAAATATGTTGGAGAAAGCGAGCTAGCAGTACGGACATTGTTCAGTCGTGCAAGAACATGTTCACCTTGCATTCTTTTCTTTGATGAGGTGGATGCACTGACAACCAAGCGTGGTAAAGAAGGTGGATGGATTGTTGAGAGACTGTTGAACCAGTTACTTGTTGAGTTAGACGGTGCAGAGCAAAGGCAAGGTGTTTTTGTAATTGGGGCCACAAACAGACCTGAGGTGATGGACCGTGCGGTCCTTCGACCTGGTAGGTTAGGTAAACTTCTGTATGTTCCTCTGCCTAGCTCAGATGAGCGAGGTTTGATCTTAAAAGCTCTTGCAAGGAAGAAGCCAATTGACAACAGCGTGGATTTGTGTGCCATTGGAAGAATGGAAGCTTGTGAAAATCTTAGTGGTGCTGATCTTGCTGCATTGATGAACGAAGCAGCGCTGGCTGCTGCTGAAGAGAAGTCGGCGGCATCAACAGAGTGTACTCTGGATGCATTGACCATCAAGTTCCGCCATTTTGAGACTGCTCTCACTAAAATCTCTCCCTCGGTGTCAGACGCGCAAAAACAATACTATCAGCGATTGGCAGATACTTTTAAGGCTGCATGA 2484 0.4364 MGRRNGGRSLHEILRRRLESCKSRYSTVDEIVNHLRANYPDYQRTKQQTLTRFVQEALESSKRGNKQLNRKPNTLIFKPDGSEDNDEDEEEEAGRSASRKRRKKVDESEEILQKAEILRLQRLQRDRSRRLSTSSSSTSNPSSSSESEESDGEDGTVSTSEDAIYGEKVEPAFDLMKTMLRASYSGTKNVKSTAEEKNVELEVTNNNKATKIDAMDGVGGNMKDGLEPKRQLRGSVSNGNGDVEVKGKGGPRFKDLGGMEKVLEELKMEVIVPLYHPQLPRKLGVRPMAGILLHGPPGCGKTTLALAIANETGFPFYQISATEVVSGVSGASEENIRELFSKAYKSAPSIVFIDEIDAIASKRENLQREMEKRIVTQLLTSMDQSSRLLQPSGSSESSDAHPGYILVIGATNRPDAVDPALRRPGRFDREIFLGVPDEYAREEILSVLTRNLTMEGSFDLRKIARSTPGFVGADLAALADKAGNLAMKRIIHERKRELSQDLLDDHGEDWWREPWLPEEMDKLVIKMSDFEEAVKLVQPSSKREGFSSIPNVKWEDIGGLDLLRQEFERYIVRRIKYPDDYKEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIQGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWIVERLLNQLLVELDGAEQRQGVFVIGATNRPEVMDRAVLRPGRLGKLLYVPLPSSDERGLILKALARKKPIDNSVDLCAIGRMEACENLSGADLAALMNEAALAAAEEKSAASTECTLDALTIKFRHFETALTKISPSVSDAQKQYYQRLADTFKAA 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1147 827 CDD RecA-like_NVL_r2-like 560 720 - -
Acco08g1147 827 ProSitePatterns AAA-protein family signature. 692 710 IPR003960 GO:0005524|GO:0016887
Acco08g1147 827 Gene3D - 436 544 - -
Acco08g1147 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 550 824 IPR027417 -
Acco08g1147 827 Gene3D - 723 803 - -
Acco08g1147 827 ProSitePatterns AAA-protein family signature. 405 423 IPR003960 GO:0005524|GO:0016887
Acco08g1147 827 MobiDBLite consensus disorder prediction 130 146 - -
Acco08g1147 827 Gene3D - 550 817 IPR027417 -
Acco08g1147 827 Gene3D - 245 434 IPR027417 -
Acco08g1147 827 MobiDBLite consensus disorder prediction 123 165 - -
Acco08g1147 827 Pfam ATPase family associated with various cellular activities (AAA) 291 434 IPR003959 GO:0005524|GO:0016887
Acco08g1147 827 Pfam ATPase family associated with various cellular activities (AAA) 593 721 IPR003959 GO:0005524|GO:0016887
Acco08g1147 827 PANTHER AAA-FAMILY ATPASE 94 825 - -
Acco08g1147 827 MobiDBLite consensus disorder prediction 92 109 - -
Acco08g1147 827 MobiDBLite consensus disorder prediction 230 250 - -
Acco08g1147 827 Pfam AAA+ lid domain 458 493 IPR041569 -
Acco08g1147 827 Pfam AAA+ lid domain 745 785 IPR041569 -
Acco08g1147 827 SMART AAA_5 287 437 IPR003593 GO:0016887
Acco08g1147 827 SMART AAA_5 588 724 IPR003593 GO:0016887
Acco08g1147 827 MobiDBLite consensus disorder prediction 59 109 - -
Acco08g1147 827 FunFam Cell division control protein 48 homolog C 436 544 - -
Acco08g1147 827 FunFam Ribosome biogenesis ATPase RIX7 242 434 - -
Acco08g1147 827 FunFam ATPase, AAA family protein 550 728 - -
Acco08g1147 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 252 544 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1147 Acco-ChrAcco08 11787745 11793403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1147 523 823 Calmodulin-binding Proteins AT3G56690 43.137 2.65e-69 246