Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1123 ATGGTTAACAGTAGTGTGTGCAGTCTCCGTACGCGTTGCCGACGTTTTCCTCACCTCCCGGAGACACCGCTATTCCCGCCACATCGTTTCTCACTTACTTGCCGGAGCCGGCGGACTCTGGTCACCGCCTCTGCAGTCTCTGAAACGTACAAAAGGAAGGAGACTAAAGAGAAGGTCATTGTGATTTCTGGACCCACCGGCGCCGGTAAAAGTCGTCTTGCATTGGAACTCGCGAAGCGGCTCAATGGCGAAATTGTCAGTGCCGACTCTGTTCAGGTGTACCAAGGTCTTGATGTCGGATCCGCTAAACCCTCTCCAAATGATAGAAAGGAGGTAAAACATCATCTGCTTGACATATTGCATCCATCTAAAGACTATTCAGTTGGACAATTTTTTGAGGATGCAAGGCAAGCGACAAGATGTATCCTTGACAATGGTCGTGTTCCCATGGTTGTTGGGGGAACTGGCTTGTATTTACGATGGTTCATATATGGAAAACCAGATGTTCCCAAATCCTCTCCAGATGTTAAATCTGAAGTATATTCAGAGTTAGCTGAACTGCAGAAAAATGAAGATTGGGATGCTGCTGTGCGTCTGGTAGTTGATGCAGGTGATGCAAAGGCCCCAACTTTAGCAGTGAATGATTGGTATCGATTACGGCGTAGCCTAGAGATTATCAAATCTAGTGGATCGCCTCCATCTGCTTTTCGGGTGCCATATGGTTCTTTCATGGAACAGGGTGATTCTAGTGATACCAATGGTTTTGAATCTTCTGATGTCCAAATTTCTGGAGATTCAATGGAAGATTCCAAGTTATCAGATTTGCCTTATGAGTTCATATGCTTTTTCCTTTCTAGTCAGAGACTTGACCTATATAAAACAATTGATCAGCGGTGTGAAGATATGCTGTTAGAGAGGGATGGGATTCTGTCTGAGGCTCGATGGCTTCTTAAGTTGGGTCTGCATCCAAACTCCAATTCTGCAACACGAGCGATTGGTTATAGACAAGCCATGGAATACTTACTTAGATGCCAACAACATGGGGGGCAGAGTTCAGCTGAAGAATTTTACAATTTTTTATCTGAATTTCAAAAAGAAACTAGGAATTTTGCAAAAAGACAATTGACATGGTTTCGCAACGAGCATATATACCACTGGCTCGATGCTTCCAAGCCACAGAATGCAATTATAGAATTCATGCACCGTGCATATCATGATTGGAGTGGAAATCTCATTGTGCCTGAGCACCTTAGAATGTCTAGATATATATCTAATCGCCAAGAAGCTGCTCAACTTAAGTCTTACCGCACAAAAAATAGGCATTTCATGAAAGATGAAGATTGTTCTCATATTCTGGAGTGGGTGAATCAGAAAGATTGA 1380 0.4348 MVNSSVCSLRTRCRRFPHLPETPLFPPHRFSLTCRSRRTLVTASAVSETYKRKETKEKVIVISGPTGAGKSRLALELAKRLNGEIVSADSVQVYQGLDVGSAKPSPNDRKEVKHHLLDILHPSKDYSVGQFFEDARQATRCILDNGRVPMVVGGTGLYLRWFIYGKPDVPKSSPDVKSEVYSELAELQKNEDWDAAVRLVVDAGDAKAPTLAVNDWYRLRRSLEIIKSSGSPPSAFRVPYGSFMEQGDSSDTNGFESSDVQISGDSMEDSKLSDLPYEFICFFLSSQRLDLYKTIDQRCEDMLLERDGILSEARWLLKLGLHPNSNSATRAIGYRQAMEYLLRCQQHGGQSSAEEFYNFLSEFQKETRNFAKRQLTWFRNEHIYHWLDASKPQNAIIEFMHRAYHDWSGNLIVPEHLRMSRYISNRQEAAQLKSYRTKNRHFMKDEDCSHILEWVNQKD 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1123 459 Hamap tRNA dimethylallyltransferase [miaA]. 59 401 IPR018022 GO:0008033
Acco08g1123 459 Gene3D - 56 450 IPR027417 -
Acco08g1123 459 Gene3D - 168 238 - -
Acco08g1123 459 FunFam tRNA dimethylallyltransferase 9 167 238 - -
Acco08g1123 459 Pfam IPP transferase 92 381 - -
Acco08g1123 459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 187 IPR027417 -
Acco08g1123 459 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 56 393 IPR039657 -
Acco08g1123 459 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 59 236 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1123 Acco-ChrAcco08 11559682 11565012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1123 62 341 C2H2 Transcription Factor Family AT2G27760 25.347 1.54e-17 82.8