Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1117 ATGGAACAACTGGTAATATTGAATGGATGGCAGTCACCGTCTTCGTCGTCGGAAGCTCAACAGAAGCAATCAGTACCTCCTCTCGAAAAGCTGGAACACCAAAAGAACAACAAGCTTCTGAGTCTGGATCCTCAAAGCAACCACCATCATCACTTTAACCCTTTCCACCATTTCCCTCGTCAAAACCCTCTTCTCAATTCCAGGCATGTAGAGCAACACCAAGACGACGAGGACCAGGATTCTTTGCTTTCTCCATCTCCTAAAGACCCCGCCCTTCATTTTCATCTTCCATATCTGCAACAAAACCAATCTTATGCAGGATTAGACACAGAGCAAGAGAGCTCTGTAAATCTTCTTCCCAAGAAGCGGTCGTATCTCCTTCCTCCTCCACCTCCGGTTTCTTATTCTTCTTCTTCCGTTACTGCTACCGTCGAATATGCAACAAAGATAGGAGAGAGTGGCAATCATCGCCAGCGACCGCCAACGAAGTCGTCAAGATTGGCGATGCGGGGTGGAGTGGGAGAGATCGTGGAGGTTCAAGGAGGCCACATTGTTCGCTCCACCGGACGAAAAGACCGTCACAGTAAGGTGTGTACGGCCAAGGGACCAAGAGATCGGCGAGTTCGTCTCTCTGCTCATACCGCCATTCAATTTTACGACGTCCAAGACCGCCTCGGCTACGACCGCCCCAGCAAAGCCGTCGATTGGCTCATTAAGAATGCCAAAGCCGCCATAGATGAGCTTGCTGAGCTTCCGGCATGGAACCCCAATACGGTAAATCAAAAAGATGTCCAGCAAGAGCAGGAGCGAGAGCAGAATCAGCCGGTGAACGAGAATGTAAACGAGAACGAGAGCCCGATTGGAGTTCACCGTGCGGTAGCCGAGGATGAGATTGCTTCTGGTAGCCAGGAAACAAGTACGCCGGTGGGAAGCGGTGGACGGATGTTGGAACAATTGGGTGAAAACCCTAACCGCGATGGGTCGGATTTTCTGCCACCGTCGTTGGGCACTGACATTGCTGATTCTATCAAGTTTTTCTTCCCGATTGTTGCGCCAGCGGCGCCAGAGACAAATTCTTCGTCGATTCATTTTCATAATTACGCACCAGATTTGGTTTCGCCAACTAGTGGTGCCTGCCAGAAACAAGATCTACGGCTCTCGCTCCAGTCCTTCCAGGACCCGATTCTGCTTCACCAAGCTCAAACTCAGACTCAGCACCATCATCATCAACATCAACAGAACGAGCAATTGTTCTCTGCAACGACCCCACTAGGATTCGATGGTTCATCCTTCCCAGAGGAACTTGGTCGATTGTATAGAATGCAAGCTTGGAATGCTGCTGCTGCTGCTGATACTGGTAATAGTGGCCACGGCGGAGGAGGAGGTTTTATCTTCAACTTGCCATCGCCAATGCCAACTCTGCCGCCGCTGCTGTTCGGCCAGAGCCAGTATCTTACTCAGAGGGGACCCCTTCAGTCCAGTAACAATCCTTCAATTCTCCACCATCGCCGGCGGAATCGGATTTGA 1527 0.5075 MEQLVILNGWQSPSSSSEAQQKQSVPPLEKLEHQKNNKLLSLDPQSNHHHHFNPFHHFPRQNPLLNSRHVEQHQDDEDQDSLLSPSPKDPALHFHLPYLQQNQSYAGLDTEQESSVNLLPKKRSYLLPPPPPVSYSSSSVTATVEYATKIGESGNHRQRPPTKSSRLAMRGGVGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKAAIDELAELPAWNPNTVNQKDVQQEQEREQNQPVNENVNENESPIGVHRAVAEDEIASGSQETSTPVGSGGRMLEQLGENPNRDGSDFLPPSLGTDIADSIKFFFPIVAPAAPETNSSSIHFHNYAPDLVSPTSGACQKQDLRLSLQSFQDPILLHQAQTQTQHHHHQHQQNEQLFSATTPLGFDGSSFPEELGRLYRMQAWNAAAAADTGNSGHGGGGGFIFNLPSPMPTLPPLLFGQSQYLTQRGPLQSSNNPSILHHRRRNRI 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1117 508 MobiDBLite consensus disorder prediction 297 332 - -
Acco08g1117 508 MobiDBLite consensus disorder prediction 1 91 - -
Acco08g1117 508 MobiDBLite consensus disorder prediction 69 83 - -
Acco08g1117 508 MobiDBLite consensus disorder prediction 270 284 - -
Acco08g1117 508 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 140 492 IPR005333 GO:0003700
Acco08g1117 508 MobiDBLite consensus disorder prediction 256 285 - -
Acco08g1117 508 Pfam TCP family transcription factor 189 281 IPR017887 -
Acco08g1117 508 MobiDBLite consensus disorder prediction 487 508 - -
Acco08g1117 508 ProSiteProfiles TCP domain profile. 190 248 IPR017887 -
Acco08g1117 508 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1117 Acco-ChrAcco08 11456641 11458359 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1117 163 499 TCP Transcription Factor Family AT3G15030 47.701 6.21e-78 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Acco08g1117 TCP 1.6e-32 No_clan