Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1086 ATGGCTGAGGCAGCGGGTCTAGCTGAGGCAGCAGGATCAAGATTTACTTCCTTGGAGCTTATTGGACAAGGTTCATTTGGTGATGTCTATAAAGCGTTTGACAAGGAACTCAACAAAGATGTTGCTATCAAAGTGATTGATTTGGATGAATCGGAGGATGAGATTGATGACATTCAGACGGAAATTGCTGTTCTATCACAATGTCGTTGTCAATATATTACCGAGTATTACGGCTCCTATCTCCATCAAACTAAACTTTTTATAATAATGGAGTACATGGCTGGAGGCTCTGTAGCTGACCTACTTCAATCAGGCCCACCCCTTGATGAAGTATCAATTGCTTGCATTTTACGTGACTTGTTGCATGCCGTTGATTATTTGCATGCTGAAGGAAAGATTCATAGAGACATCAAAGCAGCAAACATTTTATTGTCTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGCGTTTCTGCCCAGCTAACTAGGACCATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCAGAGGTCATTCAGACTGCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACAACGATTGAGATGGCAAAAGGGGAGCCTCCACTTGGTGACCTCCATCCTATGAGAGTGCTTTTCATCATACCACGTGAGAACCCACCACAGCTAGATGAACATTTTTCTCGTCCCATTAAAGAATTCGTTTCACTGTGTTTAAAAAAGCTTCCAGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAACACCGTTTTATTCGAAGTGCTAGAAAGAGTCCAAAGCTTTTGGAAAGAATAAGGGAGCGTCCTAAGTATCAAATAAAAGAAGGGGGAACACCTAGAAGTGGTCAAAGAGGGATAGGGGAGCCATCTGATACTGTGAAAGTGGCTAGAAATTTTACAGAAGAAGCTACTCAATCCATTCCCAGTGGTCAGGATAAAACCCGGAAAAATTCTGGATGGGACTTCAGCATTGGTGGATCAGAGAGTACGGGAACTTTTCGCACTGTTGCACGGCCACCTCAGTATAGAGACAAGAAAACAGATGATTCACGATATCTACTGGACCAAAAGAAGGCAACAGACAGTGTCTATCTTGGGGCATCTTCCTATAGAAATGCTCTTAATGAATCACCAGAAACTTCCCTTGAAGATGATGAATTGTCTGGGAATGGATCAGGAACTGTTATTCGATCTCCAAAAGCATCAAAATCGTCAATCTTTCATGACCAAAGCTCCCAGTCTAGCAGTTACTATGGTTCTTTTGAAGATAGTTCTTCCAGTGGAACTATTGTTGTCCGTGGTCAGCATGATGATTATGACTCTTCACAGACACCAAAGTCCAGGCTGGGACTTAATGAGAGAACTGCAAATGCCTCGCTCGAAGATAGCGCCTCAAATCTTGCAGAGGCAAAGGCTGCTATCCTAAGGCCGAGGAAAGGAAATACTCGAGAGAGAATTGCACAGGGAAAGACCAGCAAAGATGTGCAGGAAAGCAGAAGAGACCAAGTGACAAGCAGCTCTGATTAA 1572 0.4326 MAEAAGLAEAAGSRFTSLELIGQGSFGDVYKAFDKELNKDVAIKVIDLDESEDEIDDIQTEIAVLSQCRCQYITEYYGSYLHQTKLFIIMEYMAGGSVADLLQSGPPLDEVSIACILRDLLHAVDYLHAEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQTAEGYNEKADIWSLGITTIEMAKGEPPLGDLHPMRVLFIIPRENPPQLDEHFSRPIKEFVSLCLKKLPAERPSAKELLKHRFIRSARKSPKLLERIRERPKYQIKEGGTPRSGQRGIGEPSDTVKVARNFTEEATQSIPSGQDKTRKNSGWDFSIGGSESTGTFRTVARPPQYRDKKTDDSRYLLDQKKATDSVYLGASSYRNALNESPETSLEDDELSGNGSGTVIRSPKASKSSIFHDQSSQSSSYYGSFEDSSSSGTIVVRGQHDDYDSSQTPKSRLGLNERTANASLEDSASNLAEAKAAILRPRKGNTRERIAQGKTSKDVQESRRDQVTSSSD 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1086 523 Gene3D Transferase(Phosphotransferase) domain 1 12 294 - -
Acco08g1086 523 MobiDBLite consensus disorder prediction 312 351 - -
Acco08g1086 523 Coils Coil 48 68 - -
Acco08g1086 523 SUPERFAMILY Protein kinase-like (PK-like) 12 297 IPR011009 -
Acco08g1086 523 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1086 523 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1086 523 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Acco08g1086 523 FunFam serine/threonine-protein kinase dst1 isoform X1 12 299 - -
Acco08g1086 523 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 10 517 - -
Acco08g1086 523 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1086 523 MobiDBLite consensus disorder prediction 399 479 - -
Acco08g1086 523 MobiDBLite consensus disorder prediction 354 369 - -
Acco08g1086 523 MobiDBLite consensus disorder prediction 491 516 - -
Acco08g1086 523 CDD STKc_MST3_like 13 287 - -
Acco08g1086 523 MobiDBLite consensus disorder prediction 390 523 - -
Acco08g1086 523 MobiDBLite consensus disorder prediction 281 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1086 Acco-ChrAcco08 10879536 10886422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1086 1 523 MAP Kinase Kinase Kinase Kinase AT3G15220 66.606 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Acco08g1086 Pkinase 9.5e-67 CL0016