Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1047 ATGAGCCGATCAATCGAGCTGCCGCCGTTGCCCCAATATTCGTTTCGGAATTCCAAGAGGAGTGTATATTCAGGGAGCAATTCGCTGTTGATGGACCCTGAGGTTATGGAAATTCCTCCCCCAATTCATCGCCCTACGAAACTTATGAAACAGAAGGCTGTTATTAGTGACGTGATTGACATAGACAATGATGAGGATTCTGCCGATTTAGTGTTTATTGGTGAAAAAGTTGGTGGAAGCAACAAGGGAAAGGAAATGTCTGGTGATATTTGTTCCCCACCCTCTCTGGAACAATTCGGACCAGCTAGTGGTCTTGCGTCCTCCAGTGGTTTTGCTTCAGTATCACATAACGTAATCAATGTTGATGGTCACAGTTCTGATCTATCAAATGATGATGATGACTACAACGATCATTTTGCTGAAGATTTCATGGATGTCGATGAGTATGCCATGTTACAGGCACACTTTGACCATGTGGATTTACCTGCTGGAATTGAGGCACCCATTCCTTGGATGTCAAATTTTGATCTGGAAATGAAGAATTCTGAAAGTAATTCTTGGAATCCTTGGGGTAATATGCAGTTAGATGCTAAAGGTTCTCATGTGACTGAGTTATCTCAGCTTTCATGGGCAATGGAGTCTTCTGACCTCATCCAAGAAGCTTCAGCAGGTAGTTCTAGTTCACTAACCAAAAATGTTGCCATTAGTCCCCGTTCTCAAAAATTGTCTTCTCAGTTACAAGCTGAAGCTGCTCCTAACAAAAAGAAACCAAATTTTTCACAAGTTGATGGGCTTAAGCTGAACTTGAATCTAGCACTAGGGGTAGATTCATCCAAACCTCATTGGTTCAAGGGACCTTTTGGTCGTAAGAAGAAGCTTTCTATCTTAGGTGAATTTCAAAATGATGCTTTAGCTCACAAGTCAGAGTCCTTGAAGCTGCCACCTGGAGTTGAACCCCCTTATTGGTGGAAAGCTAAAAGTGTGAAAAAGGCACATGGCAAAGATGTTTTATCCCATTCAAATTTCTTTCCGCCTTTTGAAGGGTCATACCATATTCCTGGACTGGAATCAGCAAACTCTAATATGTGGAAGAATCCTCCTAACCCACCTTTTACAGATCATTCAGGTTTTTATTATCCATATGATCCTCTTGATGCCCCTCTTCCACCAATGTATGGGAATACTTGGTTTCACAATAATGCTAGTGATGAAAAGAATGAAACCACTGCTAACATCCCAGTTGTCACAATACCTGATGAAGATAGGGATGAAATCTTGAGGAAATTTCAACAGTTCAAACAGTTTGACACAGTTGAAGACACTTCAGACCATCACTATAATCGCAAGAGTTGTTCCTTGAAGCAGCATTCAAAAGCTTGGTCAAAGAAAATTCAGGAAGAGTGGAGGATTCTGGAGAAGGATTTGCCCGATACAATATTTGTTAGAGTTTATGAATCAAGGATGGATATTTTGAGAGCTGTAATTATTGGGGCAGAGGGAACTCCTTATCATGATGGTCTCTACTTTTTTGATATTTTCTTTCCCACTGGCTACCCCAATGTGCCACCAGAGGTCTACTACCACTCCGGTGGTGTTAGGATCAACCCAAATTTGTATAACTGCGGCAAAGTATGCCTTAGTCTGCTCAATACTTGGTCTGGCAATAAGAATGAAAAGTGGCTTCCTGGTGTTTCAACAATTCTACAGGTTCTTGTTTCTATACAAGGTTTAATCTTGAATGCAAAGCCTTATTTTAATGAGCCTGGTTTTGCTCATATGAGTGGTTCTGCCTCGGGCGAAATGAGGTCCCTGCAGTACAATGAGGATGCATTTCTTTTGTCATTGAAGACAATGATGTACGTGATGAAAAAGCCTCCAAAGCATTTTGAGGACTTGGTCGCAGGGCATTTCTGCAACCGGGCTCGTGATATCTTGGTGGCATGTAAAGCATACATGGATGGTGCACAAGTTGGCTGTTTGGTCAAAGGTGGGGTGCAGGATGTTGACGCGGGTGACCGGAGCTGCTCGAAGCCATTTAAAGATACTTTAGCTGGATTTGTGAATAGGCTTGTTGGAGAATTTTCCAAAGTTGGAGCTAAGGACTGTGAGAAATTCTTGCCACAGGCGGTGGCTACATCCGGGAACGTGCAGGCAGGTTGTAACCCTGATGTTGCTGCTCCTGCTACCTGA 2190 0.4256 MSRSIELPPLPQYSFRNSKRSVYSGSNSLLMDPEVMEIPPPIHRPTKLMKQKAVISDVIDIDNDEDSADLVFIGEKVGGSNKGKEMSGDICSPPSLEQFGPASGLASSSGFASVSHNVINVDGHSSDLSNDDDDYNDHFAEDFMDVDEYAMLQAHFDHVDLPAGIEAPIPWMSNFDLEMKNSESNSWNPWGNMQLDAKGSHVTELSQLSWAMESSDLIQEASAGSSSSLTKNVAISPRSQKLSSQLQAEAAPNKKKPNFSQVDGLKLNLNLALGVDSSKPHWFKGPFGRKKKLSILGEFQNDALAHKSESLKLPPGVEPPYWWKAKSVKKAHGKDVLSHSNFFPPFEGSYHIPGLESANSNMWKNPPNPPFTDHSGFYYPYDPLDAPLPPMYGNTWFHNNASDEKNETTANIPVVTIPDEDRDEILRKFQQFKQFDTVEDTSDHHYNRKSCSLKQHSKAWSKKIQEEWRILEKDLPDTIFVRVYESRMDILRAVIIGAEGTPYHDGLYFFDIFFPTGYPNVPPEVYYHSGGVRINPNLYNCGKVCLSLLNTWSGNKNEKWLPGVSTILQVLVSIQGLILNAKPYFNEPGFAHMSGSASGEMRSLQYNEDAFLLSLKTMMYVMKKPPKHFEDLVAGHFCNRARDILVACKAYMDGAQVGCLVKGGVQDVDAGDRSCSKPFKDTLAGFVNRLVGEFSKVGAKDCEKFLPQAVATSGNVQAGCNPDVAAPAT 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1047 729 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 178 701 - -
Acco08g1047 729 SMART ubc_7 462 619 - -
Acco08g1047 729 FunFam Probable ubiquitin-conjugating enzyme E2 23 422 698 - -
Acco08g1047 729 SUPERFAMILY UBC-like 444 628 IPR016135 -
Acco08g1047 729 MobiDBLite consensus disorder prediction 240 259 - -
Acco08g1047 729 Gene3D Ubiquitin Conjugating Enzyme 419 691 IPR016135 -
Acco08g1047 729 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 459 619 IPR000608 -
Acco08g1047 729 CDD UBCc 461 588 IPR000608 -
Acco08g1047 729 Pfam Ubiquitin-conjugating enzyme 464 586 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1047 Acco-ChrAcco08 10315278 10321127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1047 398 709 Miscellaneous Gene Families AT2G33770 46.914 2.16e-87 292