Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1010 ATGGTGGCGTCGTCCTTTTGGAAATTGGGGTACGCGGCTAGCTATGACAAGCTAATAACTATTATGGGGCCCACCAATACAGTGAGACAAACATCACCGGACTTATCTCGGGGCGTGTGGGAAAAATTTATTCGGAAGAGTTCGAGCTTCTTCTTCTTGCTCTTGTTGTTGTTCGATCTTCTTCATCGTGTATGTGTGAAAATGGGATTTCCGACGACCGGTCCGCTTGCCCAACTGAGTTTGCCTCCGGGTTTTCGGTTTTATCCGACTGACGAGGAGCTTCTGGTTCAATATCTATGCCGGAAAGTTGCTGGCCACCATTTCTCTCTGCAAATTATAGGCGAAATTGACTTGTATAAGTTCGACCCATGGGTCTTACCGAGCAAAGCGATTTTCGGTGAGAAAGAATGGTACTTTTTCAGTCCCAGAGACCGGAAGTACCCGAATGGGTCTCGACCCAACAGAGTTGCCGGGTCTGGATACTGGAAAGCCACCGGAACCGATAAGATCATTACCACCGAAGGCCGGAAGGTTGGCATAAAAAAATCTCTGGTTTTCTACATAGGGAAAGCACCCAAAGGAACCAAAACCAATTGGATCATGCACGAGTATCGCCTTCTCTACAATTCCAGAAAGAATGGTAGCTCCAAGCTTGATGATTGGGTTCTGTGTCGAATTTATAAGAAGAATTTGAGCGCGCAGAAGAATATGCTTTCAAGCGTTTCAAGCAAAGATTATAGTTACAGCAACGGGTCTTCTCCGTCGTCATCGTCGCAGTTGGATGACATGCTGGAATCGTTGCCGGAGATCGAGGACCGGAGCTTCAACCTGCCGCGTATGAACTCACTGAAGGCGCTACCACAAGACGAGAAGCTCAATTTCCATAATCATGGCGCCGGAAATCTTGTGGACTGGGCCAACCCGGCGATGCTTAACTCGGTACCCGACTTCGTTCCGGGAAGTCAGGGTCAGGGGATGGTGAATTATAACCCGGGAAATGACCTTTTTGTCCCTTCCATCTCTCAGCTCAGCCACACGGCGTTGCCGGCACCGAAGGCGGAGAAGCTTGGGAACTCAGTGGAGGATGGGGCTCGAAGTGGAGGGAGGAGCCGAGTGGAGAATTCTGGCGGGTACTTTCAGGCGAATTCGAACGTGGGATTCTCGAACTCCATTGACCCGTATGGATTCAAATACCCGAGTCAGACAATCGGGTTCCGATCTCAACCGTAA 1230 0.4959 MVASSFWKLGYAASYDKLITIMGPTNTVRQTSPDLSRGVWEKFIRKSSSFFFLLLLLFDLLHRVCVKMGFPTTGPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKSLVFYIGKAPKGTKTNWIMHEYRLLYNSRKNGSSKLDDWVLCRIYKKNLSAQKNMLSSVSSKDYSYSNGSSPSSSSQLDDMLESLPEIEDRSFNLPRMNSLKALPQDEKLNFHNHGAGNLVDWANPAMLNSVPDFVPGSQGQGMVNYNPGNDLFVPSISQLSHTALPAPKAEKLGNSVEDGARSGGRSRVENSGGYFQANSNVGFSNSIDPYGFKYPSQTIGFRSQP 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1010 409 Gene3D NAC domain 90 234 IPR036093 GO:0003677|GO:0006355
Acco08g1010 409 SUPERFAMILY NAC domain 76 229 IPR036093 GO:0003677|GO:0006355
Acco08g1010 409 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 80 271 - -
Acco08g1010 409 MobiDBLite consensus disorder prediction 352 375 - -
Acco08g1010 409 Pfam No apical meristem (NAM) protein 82 206 IPR003441 GO:0003677|GO:0006355
Acco08g1010 409 FunFam NAC domain-containing protein 72-like 90 234 - -
Acco08g1010 409 MobiDBLite consensus disorder prediction 243 262 - -
Acco08g1010 409 ProSiteProfiles NAC domain profile. 81 229 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1010 Acco-ChrAcco08 9888742 9890212 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1010 68 406 NAC Transcription Factor Family AT4G27410 57.983 2.66e-124 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco08g1010 NAM 2.6e-36 No_clan