Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0963 ATGAGCGCCGTCAACTCTGTCCTTCTTGTCCCTTTTGTATCTCGAAGCCGCGTTAAAGCGGGTCCCAGAGATCCTTCATCCCACCACACCCCCATGTTCTTCGAACCCTTTTCCACGATTTTAACAACTCAGAAATTTTATATTGCAAACCAAACACAATCTCCAGTTGCTTCAACTCTTTCTCGTCTCCATCATATCTCTTCACCTGGCATCACATCATGCGCATTTTGCTCCTTCCATGAGACCCGGAAGTTAAAGATGGTGAAGATGAAAATAGTGAAGTGGGTTTTTAATGTTTTGGCAGTGTTTTCATTCTTGGTGGATGAGTCATTTTCCTCATACACCCCTCCTGATAATTATCTGATTGCTTGTGGTTCTTCTCAAAATATCACTTTCCAAGGTCGCACTTTTGTACCTGATTCACAACACTCGTCATTAGTATTGGAAACTGGGAATTCTATTGTTGCTGCTAATTCCAGTTCTCGTGTCCCATTCCCCGTATACCAATCAGCTCGGATTTTCACCGAGAAAGCTTCTTATAACTTTGAAATCCAGCAAGAAGGCCGCCACTGGGTTCGCCTGTACTTCTTCCCTGTTAAAAACCCCAGCCATGACTTGACTTGTGCTTCTTTAACTGTGGTCACTGATGATTTTGTTCTCCTGAATAACTTCACCTTTAAGAACTACAATGGTTCTTATATGTTCAAGGAGTATGCAATCGATGTTACATCTGATACGTTGACTGTTACCTTAATTCCTTCAAATGGTTCAGTGGTTTTTGTCAATGGTATTGAAGTTGTATCAATGCCATATGACTTGTTTGTTGATCAGGCATTGGCTTTAAACCCAACAGAACCATTCAGGGGCCTTTCTGTACTCGCCTTTGAAACCGTTTACCGGTTGAACATGGGAGGTCCCCTGCTTAATGCTCAAAATGACACCCTTGGAAGGACCTGGGAGAATGATCTGAAGTACCTTCATGTGAATAGTTCTGTCCTTAATGTTTCAGTTAGCCCTTCAACTATCAAGTATCCAGCTGGTGTTTCACCTGAGACAGCTCCAAATTGGATTTATGCGACTGCAGAAACTATGGGTGATGCAAATGTGGCTCAAAATAGTTTCAACATTACTTGGGTCTTCCCTGTGGATCCAAACTTCTCTTATTTAATTAGGGCACACTTTTGTGATATTATGAGCATATCCCTCAATAGTTTAGTATTTGATATGTTCATAAATTCTGATATAGCTCTTGGAAGTCTTGACCTCTCATCCATGACTGGTAACTTGGCTGTGCCTTACTACAAGGACTTCGTTTCTAACGCCTCCAAAGATTCAAACACGTTGAGTGTAAGTGTTGGTCCAGATACAATGGCAGATATTACAAATGCCTCCATGAATGGACTGGAGATAATGAAAATTAGCAATTCATTGAAGAGCTTGGATGGGCTTTATTCAGTGGAGAGTCTTCTTCCTAGTTCATCCTCAAAGGCGAACAAGATAAGAATAATAGTTGGTTCTGCTGTCGGTGCAGTAGCTGCTATAGCATTGTTTGGTTTGTGTTACTATTGCTGCTTTGTGAGACGCCAGTCAAAGTCCCCTCAACAAGGTCATTCATGGCTGCCTTTGCCCTTGTATGGAAACTCTCAGACAATGACAAAGTCAACATTATCACAGAAGAGCGGAACTGCGAGTTACATTTCTTTAGCTTCGACGAATCTTGGGCGTTTCTTCAGTTTCCAAGAGATCCTAGATGCAACCAACAAATTTGATGAGAAGCTGCTTCTTGGGGTTGGTGGTTTTGGGAGGGTTTATAAAGGAACACTTGAAGATGGCACCAATATAGCCGTCAAAAGAGGCAACCCCAGATCTGAACAAGGCATTGCTGAATTCAGAACAGAAATCGACATGTTGTCCAAGCTTCGCCATCGTCATCTTGTGTCTCTCATAGGCTATTGTGATGAGAGGTCAGAAATGATTCTTGTCTATGAATATATGGCTAATGGTCCCCTTAGAAGCCATTTGTATGGAGCTGATCTGCCACCTCTATCATGGAAGCAGCGGCTCGAAATTTGCATTGGCGCAGCTAGGGGCCTTCATTATCTTCACACTGGTGCCGCTCAAAGCATAATACACAGAGATGTAAAGACAACAAACATACTCTTGGATGAAAATTTTGTTGCCAAAGTAGCTGACTTTGGCCTCTCAAAAACTGGTCCCGCTCTGGATCAGACCCATGTAAGCACCGCGGTGAAAGGCAGCTTCGGTTATCTTGATCCTGAGTACTTCAGACGGCAACAACTCACAGAGAAATCGGATGTCTATTCATTTGGAGTAGTTCTAATGGAAGCATTATGCACAAGACCAGCTTTGAATCCTGTCCTTCCAAGGGAGCAAGTTAACATAGCTGAGTGGGCAATGACCTGGCAGAAGAAGGGCATGCTTGATCAAATCATGGATCAAAATCTGGTGGGGAAGGTGAGTCCTGCTTCTCTGATGAAGTTTGGGGAGACGGCTGAGAAATGCTTGGCCGAGCACGGCGTGGACAGGCCATCCATGGGAGATGTATTGTGGAATCTTGAGTATGCCCTGCAGCTTCAAGAGACCTCTTCAGCACTCACAGAACCTCAAGATAATAGCACAAATCACATTACTGGGATTCAGCTGACCACACTTGAGCCATTTGATAACAGTGTAAGTATGATTGATGGGAGTAACTCTGTCACAGATGATGATGCAGAAGATGCTGCCACAAGTGCTGTGTTCTCACAATTGGTAAATCCTCGAGGAAGATAA 2793 0.4325 MSAVNSVLLVPFVSRSRVKAGPRDPSSHHTPMFFEPFSTILTTQKFYIANQTQSPVASTLSRLHHISSPGITSCAFCSFHETRKLKMVKMKIVKWVFNVLAVFSFLVDESFSSYTPPDNYLIACGSSQNITFQGRTFVPDSQHSSLVLETGNSIVAANSSSRVPFPVYQSARIFTEKASYNFEIQQEGRHWVRLYFFPVKNPSHDLTCASLTVVTDDFVLLNNFTFKNYNGSYMFKEYAIDVTSDTLTVTLIPSNGSVVFVNGIEVVSMPYDLFVDQALALNPTEPFRGLSVLAFETVYRLNMGGPLLNAQNDTLGRTWENDLKYLHVNSSVLNVSVSPSTIKYPAGVSPETAPNWIYATAETMGDANVAQNSFNITWVFPVDPNFSYLIRAHFCDIMSISLNSLVFDMFINSDIALGSLDLSSMTGNLAVPYYKDFVSNASKDSNTLSVSVGPDTMADITNASMNGLEIMKISNSLKSLDGLYSVESLLPSSSSKANKIRIIVGSAVGAVAAIALFGLCYYCCFVRRQSKSPQQGHSWLPLPLYGNSQTMTKSTLSQKSGTASYISLASTNLGRFFSFQEILDATNKFDEKLLLGVGGFGRVYKGTLEDGTNIAVKRGNPRSEQGIAEFRTEIDMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEALCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDQNLVGKVSPASLMKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLQETSSALTEPQDNSTNHITGIQLTTLEPFDNSVSMIDGSNSVTDDDAEDAATSAVFSQLVNPRGR 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0963 930 ProSiteProfiles Protein kinase domain profile. 589 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0963 930 FunFam Receptor-like protein kinase FERONIA 294 475 - -
Acco08g0963 930 Pfam Malectin-like domain 122 473 IPR024788 -
Acco08g0963 930 CDD STKc_IRAK 595 860 - -
Acco08g0963 930 Pfam Protein tyrosine and serine/threonine kinase 594 855 IPR001245 GO:0004672|GO:0006468
Acco08g0963 930 FunFam Putative receptor-like protein kinase 119 270 - -
Acco08g0963 930 Gene3D Phosphorylase Kinase; domain 1 548 664 - -
Acco08g0963 930 Gene3D - 119 270 - -
Acco08g0963 930 Gene3D - 293 475 - -
Acco08g0963 930 PANTHER OS07G0166700 PROTEIN 575 866 IPR045272 GO:0004714|GO:0006468
Acco08g0963 930 FunFam receptor-like protein kinase FERONIA 550 664 - -
Acco08g0963 930 FunFam Receptor-like protein kinase FERONIA 665 880 - -
Acco08g0963 930 Gene3D Transferase(Phosphotransferase) domain 1 665 885 - -
Acco08g0963 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 709 721 IPR008271 GO:0004672|GO:0006468
Acco08g0963 930 ProSitePatterns Protein kinases ATP-binding region signature. 595 617 IPR017441 GO:0005524
Acco08g0963 930 SMART serkin_6 589 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0963 930 SUPERFAMILY Protein kinase-like (PK-like) 566 860 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0963 Acco-ChrAcco08 9267719 9271246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0963 112 870 Receptor kinase-like Gene Family AT2G21480 53.558 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Acco08g0963 Malectin_like 1.5e-37 CL0202