Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0943 ATGATTTCGCTTTCTGCTTCTTCTGACTTCAAACAGTATCTTCAAACAAGTCGTCCCAATGATCCAGGTCAAGGAGATTACATAATCAAAATAGACCGCAAAGGGTATCCACAATTCCTTGAACTGAGAGGTTCCAAAGTGTTTTTTAGAGCTGGATCATGGAATGGCATCACTTTAACAGCGCTTCCAAATCATAATCCAGATCCTATAGTTACTGGTGATTTTGTGGTGAATGAAAAAGAGGTGTACTTTACGACTGAGCTGAGAAATAATTCGATTTTCTCCAGATTTGCAGTGAACCCATCTGGGATTGGGCAGCGTTTTGATTGGGTAATTCAAACAAGCAGCTGGCAGTTAATAAGCATTGGTCCTGCTGACCAGTGTGAAAATTATGCCTTGTGTGGTGCAAATTCTATCTGCAACATTAATAACAATCCTGTTTGTGAATGCCTGAGAGGGTATGAACCCAAGAATTTTAAGGAATGGAATGTGTCTGATTGGGGCAGTGGCTGCACTAGAAGGGTCTCTTTGAACTGTGGTGGTGGCGATGGGTTTAAGCAGTACACAGGCATCAAGTTACCAGACACCTCTTCTTCATGGCACAACATGACCATGAACCTTGAGGAATATCATTTTTGGTATGAAGGCCGTGGGAGCACTGACAAGAAGAAGAAGCTAGTAGGAATTGTGGTTGGCTGTGCAATATTTGTAATGAGTTTCATGATTATTGGATTAACTTTAATTGCAAGGAAAAGGAAACTTCGAAATTCAGGGAAAGAGGTCATGGATATTCCAACATTTGATCTATCAATTATAGCTAAGGCTACTGATAATTTTTCTACCATCAACAAATTGGGTGAAGGTGGCTTTGGGGCAGTATACAAGGGTACTTTAGAAGATGGACAAGAGTTAGCTGTGAAAAGGCTGTCAGCAAAATCAGGTCAAGGGATGGAAGAGTTGAAAAATGAAATTGTGCTAATAGCAAAACTTCAACATCATCATTTTGGGAATGGAGGGCATGGAAGCATTAGCAAGAAGAAGCTAGCAGGAATTATGCTAAAGGTTCATGCCTTTTGCATTGCAAGTGATGTTCCTCCTAATCCAACTTCTCTAGACCAAAACTCACAAAATGAAATTTCTCAAACCACTCTAGAGGGGAGATGA 1164 0.4046 MISLSASSDFKQYLQTSRPNDPGQGDYIIKIDRKGYPQFLELRGSKVFFRAGSWNGITLTALPNHNPDPIVTGDFVVNEKEVYFTTELRNNSIFSRFAVNPSGIGQRFDWVIQTSSWQLISIGPADQCENYALCGANSICNINNNPVCECLRGYEPKNFKEWNVSDWGSGCTRRVSLNCGGGDGFKQYTGIKLPDTSSSWHNMTMNLEEYHFWYEGRGSTDKKKKLVGIVVGCAIFVMSFMIIGLTLIARKRKLRNSGKEVMDIPTFDLSIIAKATDNFSTINKLGEGGFGAVYKGTLEDGQELAVKRLSAKSGQGMEELKNEIVLIAKLQHHHFGNGGHGSISKKKLAGIMLKVHAFCIASDVPPNPTSLDQNSQNEISQTTLEGR 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0943 387 Pfam Protein tyrosine and serine/threonine kinase 281 335 IPR001245 GO:0004672|GO:0006468
Acco08g0943 387 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 333 - -
Acco08g0943 387 ProSiteProfiles Protein kinase domain profile. 279 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0943 387 ProSiteProfiles EGF-like domain profile. 124 160 IPR000742 -
Acco08g0943 387 SUPERFAMILY Protein kinase-like (PK-like) 259 334 IPR011009 -
Acco08g0943 387 Gene3D Phosphorylase Kinase; domain 1 253 337 - -
Acco08g0943 387 MobiDBLite consensus disorder prediction 366 387 - -
Acco08g0943 387 ProSitePatterns Protein kinases ATP-binding region signature. 285 307 IPR017441 GO:0005524
Acco08g0943 387 Pfam S-locus glycoprotein domain 49 158 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0943 Acco-ChrAcco08 9033745 9039736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0943 226 335 Receptor kinase-like Gene Family AT4G23190 44.828 7.67e-25 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g0943 S_locus_glycop 8e-27 No_clan