Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0939 ATGTTTAGAGCTGGGTCATGGAATGGCATCACTTTAACAGGGCTACCAAATCATAATCCAGATCCTATAGTTACTGATGATTTTGTGGTCAATGAAAAAGAGGTTTACTTTACGTCTGAGCTGAGAAATAATTCGATTTTCTCCAGATTTGCACTGAACCCATCTGGGATTGCCCAGCGTTTTGATTGGGTAATTCAAACAAGCAGCTGGCAGTTAATGAGCACTGGTCCTCTTGACCTGTGTGAAAATTATGCCTTGTGTGGTGCAAATTCTATCTGCAACAGTAATAACAATCCTGTTTGTGAATGCCTGAAAGGGTATGAACCCAAGAATTTTAAGGAATGGAATGTGTCTGATTGGAACAGTGGCTGCACCAGAAGGGTTTCTTTGGATTGTGGTGGTGGTGATGGGTTTAAGCAGTACACAGGCATCAAATTACCAGACACCTCTTCTTCATGGTACAACACGACCATGAACCTTGAGGAATGTAAGAAAACATGTCTGCAAAACTGTTCTTGTGCAGCTTATTCGAATTTGGATATACGAGGTGAAGGAAGTGGCTGCCTCGTATGGTTTGATCAACTGTTGGACATGAGACAATTTCCTGCAGGGGGACAAGACATCTATGTACGGGTTCCTGCTTCAGAGCTAGATCAATTTAGGGATGAAGGCCGTGGAAGCATTGGCAAGAAGAAGCTAGTAGGAACTGTGGTTGGCTGTGCAATATTTGTAATGATCATGATTCTTGCATTAACTTTAATTGCAAGGAGAAGGAAACTTCGAAATTCTGGAAAAGAAGTCATGGATATTCCAACGTTTGATTTGTCAGTCATAACTAAGGCCACTGATAACTTTTCTACCAGTAACAAATTGGGTGAAGGTGGCTTTGGGCCAGTATACAAGGGCACTTTAGAAGATGGACAAGAGTTAGCTGTTGATGCCAACACTAACAAAGTTGTCGGAACATATGGATATATGCCTCCAGAATATGTTGTACATGGACATTTTTCAATGAAATCCGATGTCTTTAGCTTTGGTGTAATAGTACTAGAAATTGTTATTGGGAAGAAGAACCGGGGATTTTTAGACCAAGAATACTGCCTTAATCTTCTTGGACATGCATGGAGATTGTGGGGAGAAGGAAGACCAATGGAATTGTTGGATGAATGTTTAAAGAAAAGTTGCAATGAATCTGAAGTCATAAGATGCATACATGTAGGACTATTGTGTGTTCAACAGAAAGCTGAAGATAGACCTGATATGTCAGCTGTGCTTCTAATGTTAAATGGTGAGAAGTTGTTGCCAAAACCAAAAGTTCCTGGTTTCTACACTGCTGGTGATGTCGTTGATGATCTAAAGCATGAGATTTCTCAAAATGAAATCTCTCAAACCATGCTAGAGGGAAGATGA 1410 0.405 MFRAGSWNGITLTGLPNHNPDPIVTDDFVVNEKEVYFTSELRNNSIFSRFALNPSGIAQRFDWVIQTSSWQLMSTGPLDLCENYALCGANSICNSNNNPVCECLKGYEPKNFKEWNVSDWNSGCTRRVSLDCGGGDGFKQYTGIKLPDTSSSWYNTTMNLEECKKTCLQNCSCAAYSNLDIRGEGSGCLVWFDQLLDMRQFPAGGQDIYVRVPASELDQFRDEGRGSIGKKKLVGTVVGCAIFVMIMILALTLIARRRKLRNSGKEVMDIPTFDLSVITKATDNFSTSNKLGEGGFGPVYKGTLEDGQELAVDANTNKVVGTYGYMPPEYVVHGHFSMKSDVFSFGVIVLEIVIGKKNRGFLDQEYCLNLLGHAWRLWGEGRPMELLDECLKKSCNESEVIRCIHVGLLCVQQKAEDRPDMSAVLLMLNGEKLLPKPKVPGFYTAGDVVDDLKHEISQNEISQTMLEGR 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0939 469 Pfam S-locus glycoprotein domain 2 111 IPR000858 GO:0048544
Acco08g0939 469 Pfam PAN-like domain 132 198 IPR003609 -
Acco08g0939 469 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 317 419 - -
Acco08g0939 469 Gene3D Hepatocyte Growth Factor 129 209 - -
Acco08g0939 469 Pfam Protein tyrosine and serine/threonine kinase 322 424 IPR001245 GO:0004672|GO:0006468
Acco08g0939 469 Gene3D Transferase(Phosphotransferase) domain 1 317 432 - -
Acco08g0939 469 SUPERFAMILY Protein kinase-like (PK-like) 315 434 IPR011009 -
Acco08g0939 469 SMART ntp_6 133 212 IPR003609 -
Acco08g0939 469 ProSiteProfiles PAN/Apple domain profile. 132 213 IPR003609 -
Acco08g0939 469 ProSiteProfiles EGF-like domain profile. 77 113 IPR000742 -
Acco08g0939 469 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 131 212 - -
Acco08g0939 469 SUPERFAMILY Protein kinase-like (PK-like) 265 312 IPR011009 -
Acco08g0939 469 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 308 433 - -
Acco08g0939 469 Gene3D Phosphorylase Kinase; domain 1 257 316 - -
Acco08g0939 469 CDD PAN_AP_plant 128 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0939 Acco-ChrAcco08 8935885 8938585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0939 315 443 Receptor kinase-like Gene Family AT4G11480 55.725 1.91e-43 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g0939 PK_Tyr_Ser-Thr 2e-07 CL0016