Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0938 ATGGAGAGGAAAGTGATTGAGGGCCCTGGTGCTTCAAATGCTCGATACTTAGGGGCATGGTTTAAGAAGTCTCCTTCTACAATCTTCTGGGTGGCCAATCGAGACACGCCTCTGAACGGAAGTGAAAAGGGTGTTTTACAATTAGATGACCAAGGATTTCTCAGCCTTCTTGATTCCACAAACAACAACACAGTGTGGTCCTCCAATCATTCATCGACCAGAACCACAGCATATAATCCTTTTGCGCAACTCTTGGATTCAGGAAATCTCGTGGTGAAAATTGGATATGGTAGTGACAACAGTGGTAACTTGAAGCAACACTTGTGGCAGAGTTTTGACCACCCTTGTGACACCTTAATGCCAGGAATGAAGATTGGGTGGGATCAAGAAACGGGTTTGGATAGATTTCAGTTATCTTGGAAAAGTTCAGTTGATCCTGGTCGGGGAGATTATGCAATCAAAATAGACCGTAGAGGGTACCCACAAATCTTTCAACTGAAAGGTTCTATGGTGATGGTTAGAGGTGGTTCATGGAATGGCTTCTATTTCACTTCGTTTCCAAATCATATGGATCATGTAATAAATGCTGAGTTTGTGATGAATGAAAAAGAGGTATATTACAAGTTTGATCTTATAAATAATTCAACTTTCTCCAGATATGTATTGAGCTCTTCGGGAATAGCACAGCGTTTTGATTGGGCAACTCAAACAAGCAGCTGGCTGGTAGTGAACACTGGTACACCTGACACGTGTGCTAATTACGCCTTATGTGGTGCAAATTCTATCTGTAACATTAGTAACAATCCTGTTTGTGAATGCCTGAGAGGGTATGAACCCAAGAATTTTAAGGAATGGAATGTGTCTGATTGGAACAGTGGCTGCACTAGAAGGGTCTCTTTGGACTGTGGTGGTGGTGATGGGTTTAAGCAGTACACAAGCATCAAGTTACCAGACACCTCTTCTTCATGGTACAACACGACCATGAACCTTGAGGAATGTAAGAAAATATGTCTGCAAAACTGTTCTTGTGCAGCTTATTCGAATTTGGATATACGAGGTGAAGGAAGTGGCTGTCTCTTATGGTTTGATCAACTGTTGGACATGGTACAATTTCCTGCAGGGGGCCAAGACCTCTATGTACGACTTCCTGCTTCAGAGCTAGATAATTTTAGGGATGAAGGCCGTGGGGGCATTGGCAAGAAGAAGCTAGTAGGAATTGTGGTTGGTTGTGCAATATTTGTAATGAGTTTCGTGATTCTTGGATTAACTTTAATTGCAAGGAAAATAAAACTTCGAAATTATGGGAAAGAAGTCATGGATATTCCAATATTTGATTTGTCAGTCATAATTAAAGCTACTGATAATTTTTCTACCATTAACAAATTGGGTGAAGGTGGCTTTGGGCCAGTATACAAGGGTACTTTAGAAGATGGACAAGAGTTAGCTGTGAAAAGATTGTCAGCAAAATCAGGTCAAGGGATAGAAGAGTTGAAAAATGAAATTGTGTTGATAGCAAAACTTCAACATCGTAATCTTGTGAAGCTTCTTGGTTGCTGCATTGTGGGAGACGAGAAGTTGTTGATTTATGAATATATGCCAAATAAGAGCTTGGACCAGTTTGTTTTTGATATAACTCATAGCAACCTATTGGATTGGCCTAAGCGTTGGCATATTATTCATGGCATTGCTCGAGGACTTATCTATCTTCATATAGATTCCAGATTGAGAATCATTCATAGAGACCTTAAAACTAGCAATATTTTGCTAGATGCTTACATGAATCCAAAAATATCAGATTTTGGCCTTGCTCGCACATTTTGGGATGATCAAATTGATGCCAAAACTAATAAAGTTGTCGGAACATATGGATATATGTCTCCTGAATATGTTGCACATGGACATTTTTCAATGAAATCCGATGTTTTTAGCTTTGGTGTAATAGTGCTAGAAATTGTTAGTGGGAAGAAGAACCGAGGATTTTTAGACCAAGAATGCTGCCTTAATCTTCTTGGACATGCATGGAGACTGTGGGGACAAGGAAGACCAATGGAACTATTGGATGAATGTTTAAAGAAAAGTTGCAATGAATCTGAAGTCATAAGATGCATACATGTAGGGCTATTATGTGTTCAACAGAAAGCTGAAGATAGGCCTGACATGTCAGCTGTAGTACTAATGTTAAATGGTGAGAAGTTGTTGTCACAACCAAAAGTTCCTGGTTTTTATACTGCTAGTGATGTCCTTACTGATCCAAGCTATGAAATTTCTCAAACCATACTAGAGGCAAGATGA 2292 0.3966 MERKVIEGPGASNARYLGAWFKKSPSTIFWVANRDTPLNGSEKGVLQLDDQGFLSLLDSTNNNTVWSSNHSSTRTTAYNPFAQLLDSGNLVVKIGYGSDNSGNLKQHLWQSFDHPCDTLMPGMKIGWDQETGLDRFQLSWKSSVDPGRGDYAIKIDRRGYPQIFQLKGSMVMVRGGSWNGFYFTSFPNHMDHVINAEFVMNEKEVYYKFDLINNSTFSRYVLSSSGIAQRFDWATQTSSWLVVNTGTPDTCANYALCGANSICNISNNPVCECLRGYEPKNFKEWNVSDWNSGCTRRVSLDCGGGDGFKQYTSIKLPDTSSSWYNTTMNLEECKKICLQNCSCAAYSNLDIRGEGSGCLLWFDQLLDMVQFPAGGQDLYVRLPASELDNFRDEGRGGIGKKKLVGIVVGCAIFVMSFVILGLTLIARKIKLRNYGKEVMDIPIFDLSVIIKATDNFSTINKLGEGGFGPVYKGTLEDGQELAVKRLSAKSGQGIEELKNEIVLIAKLQHRNLVKLLGCCIVGDEKLLIYEYMPNKSLDQFVFDITHSNLLDWPKRWHIIHGIARGLIYLHIDSRLRIIHRDLKTSNILLDAYMNPKISDFGLARTFWDDQIDAKTNKVVGTYGYMSPEYVAHGHFSMKSDVFSFGVIVLEIVSGKKNRGFLDQECCLNLLGHAWRLWGQGRPMELLDECLKKSCNESEVIRCIHVGLLCVQQKAEDRPDMSAVVLMLNGEKLLSQPKVPGFYTASDVLTDPSYEISQTILEAR 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0938 763 Gene3D Hepatocyte Growth Factor 299 378 - -
Acco08g0938 763 Pfam S-locus glycoprotein domain 174 281 IPR000858 GO:0048544
Acco08g0938 763 SMART ntp_6 303 382 IPR003609 -
Acco08g0938 763 SUPERFAMILY alpha-D-mannose-specific plant lectins 28 146 IPR036426 -
Acco08g0938 763 ProSiteProfiles Protein kinase domain profile. 456 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0938 763 Gene3D Transferase(Phosphotransferase) domain 1 532 737 - -
Acco08g0938 763 ProSiteProfiles Bulb-type lectin domain profile. 1 105 IPR001480 -
Acco08g0938 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 532 735 - -
Acco08g0938 763 Pfam Protein tyrosine and serine/threonine kinase 458 724 IPR001245 GO:0004672|GO:0006468
Acco08g0938 763 ProSiteProfiles PAN/Apple domain profile. 302 384 IPR003609 -
Acco08g0938 763 Pfam PAN-like domain 302 368 IPR003609 -
Acco08g0938 763 PIRSF SRK 5 759 IPR024171 GO:0004674
Acco08g0938 763 Pfam D-mannose binding lectin 27 141 IPR001480 -
Acco08g0938 763 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 718 - -
Acco08g0938 763 SMART blect_4 2 115 IPR001480 -
Acco08g0938 763 Gene3D - 10 112 IPR036426 -
Acco08g0938 763 SMART serkin_6 456 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0938 763 SUPERFAMILY Protein kinase-like (PK-like) 437 727 IPR011009 -
Acco08g0938 763 Gene3D Phosphorylase Kinase; domain 1 425 531 - -
Acco08g0938 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 423 531 - -
Acco08g0938 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 301 382 - -
Acco08g0938 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Acco08g0938 763 CDD B_lectin 9 115 IPR001480 -
Acco08g0938 763 CDD STKc_IRAK 462 729 - -
Acco08g0938 763 CDD PAN_AP_plant 298 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0938 Acco-ChrAcco08 8909639 8913183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0938 384 748 Receptor kinase-like Gene Family AT4G23190 50.933 8.62e-124 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g0938 PK_Tyr_Ser-Thr 2.3e-45 CL0016