Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0932 ATGTGTAAACCAGCCAACACCATCACTACAACAATGGCCATCCTTCCTTTTGTGATTGTTCTTCTCAAAATGCTTCTGTTCTCGCGGTTATCTTCTGCCATTGATACTATTACACGTTCTCAGCCCCTTCATGATGATGGAAGAACCACCTTGGTGTCTAAAGATGGAAGATTTGAGCTTGGTTTCTTCAGCCCAGGTAGTTCAAAAAACCGTTTTATTGGAATCTGGTACAAAAATATTCCAACTAGAACTGTCGTTTGGGTGGCAAACCGTGAGATACCAGTCAAAGATAACTCAGGCATGTTGAGCATAAACACGGAGGGACATCTCGTGCTCCTTGACCGGAACGAGACAATTATTTGGGTGGCAAATTCATCAACAAGGGCCTTGACTCCAATTGTGCAGCTTTTAGGCTCTGGAAATTTGATACTAAGAGATGAGAAAGACCAAAATCCACAAAATTACTTGTGGCAAAGCTTTGACTATCCTTCTGATACCTATTTGCCAGGTATGAAGTTTGGATGGGACCTAAGAACTGGTCTAAATAGGCGAATCATAGCATGGAAGAATTGGGATGACCCTTCTCCTGGAGATTTCACATGTGAGCTCATGCTTCATGATTTCCCAGAAGTAGTTGCTTGGAAAGGTCGAACAAAATATCTAAGGAGTGGCCCTTGGGATGGTCTTCGATTTAGTGGCACTTCACTACCTGTGAACAGATCCAGTTTTGCGTATGGGGTTGTCTCTAATAAGGATGAGGTGTATTACACATACAACACCACAATTGAGTCGGTGATAAGAAGAAGTGTTTTCAACCAATCAACATACACTATCTATAACTTAATATGGATAGAAGATGATCAAATATGGAAGCCTTGGATCTTCTTTCCATCAGACAACTGCGATAGATATAATCTTTGTGGTCCAAATGGAAATTGTGTCATAGGTGGGGCACCTATATGCCAGTGCTTAAGAGGATTCACACCAAAATCTCCAAAGAACTGGGATGCTATGGATTGGAGTGAAGGCTGTGTTCGAAGTGATGAATCCTGGAGCTGCAGGGTAAAAGACAAAGATGGTTTTTTGAAAATGAGTGGGCTCAAATTACCAGACACTACACATACTTGGGTTGATGCTAGTATGACACTTGAGGAGTGCAAAGCAAAGTGCATAGAGAATTGTTCTTGCACTGCTTATACTAATTCAGATACCGTTAGTTCTAGTGGTTGTGCCATTTGGTTTGGTGCTCTAATTGACATAAGGGAGATTTCCCTTCATGCTGATCTAGATCTATATATTCGCCTTGCAGCTTCAGAAATAGCTGAAGTTAAAGATCGTGGTAGGAGCAAGACAAAGATGATTGTGATAATAGCTCCCATTGTATTTGCTTTTGTGATGGTTATCATTTTCCTTTGCATTTACAAGAGGAGAAGAGAAGTAAATGATGTTGAAGACTCAAAAAGAGATATAGAAATTCCTTTCTATGACTATGTTGTGATAGCTATTGCTACTAACAATTTCTCAATCAACAAGAAGCTTGGTCAAGGTGGTTTTGGACCTGTATACAAGGGTACATTAACAGATGGACAAGAGATTGCTATAAAGCAGCTTTCTAAAACCTCTCACCAAGGAATGAAAGAGTTTAAGAATGAAGTCATTTTGTGCTCTAAACTTCAACATCAGAATCTTATTAAGGTTCTTGGTTGTTGCATCAAAGGAGAAGAGAAGATGCTTATATATGAATACATGCCCAACAAGAGTCTGGATTCATGGATTTTTGGTTCTATTACTCAACGTAATATGCTTGATTGGTCCAAACGTTTTCATATTATAAGTGGAGTAGCTCATGGGCTTCTATATCTTCATCAATATTCTAGATTGAAGATTATCCATAGAGATCTCAAAGCAAGCAATGTATTGTTAGACAATGAAATGAACCCAAAAATTTCAGATTTTGGTTTGGCAAGGATTTTTGGAGGAGGTCAAATTGAAGAAAATACAAATAAGGTGGTGGGTACATATGGATACATGGCCCCTGAATATGCCTATGATGGAATATTTTCTATAAAATCAGACGTATTCAGCTTTGGAATATTACTACTAGAAATAGTTAGTGGAATGAAGAGCAGAAGACTTTCCTATCCAAACCAAAGTCTTAATCTTATAGGGCATGTTTGGAGGCTATGGAAGGAGGGCATGCCATTAAAATTGATTGATGCCTGTTTGGAAGTCTCTCTTGCTATATCAGAAGCGCTGCGTTGTATCCATATTAGTCTCCTTTGCGTGCAGCACCATCCTGAAGATAGACCAAACATGGCCTCCGTGGTTATGATGTTAAGCAGTGAGAGTGACTTGCCTCAACCCAAAGAGCCTGCTTTCCTTTTAGAAAATATTCCACGTGGACAAGAATCTTCTCAGAAGAATCATACAAGTTCTTCCATCAATGAAATATCTTTTACCGAATTACATGCCAGATAA 2478 0.3927 MCKPANTITTTMAILPFVIVLLKMLLFSRLSSAIDTITRSQPLHDDGRTTLVSKDGRFELGFFSPGSSKNRFIGIWYKNIPTRTVVWVANREIPVKDNSGMLSINTEGHLVLLDRNETIIWVANSSTRALTPIVQLLGSGNLILRDEKDQNPQNYLWQSFDYPSDTYLPGMKFGWDLRTGLNRRIIAWKNWDDPSPGDFTCELMLHDFPEVVAWKGRTKYLRSGPWDGLRFSGTSLPVNRSSFAYGVVSNKDEVYYTYNTTIESVIRRSVFNQSTYTIYNLIWIEDDQIWKPWIFFPSDNCDRYNLCGPNGNCVIGGAPICQCLRGFTPKSPKNWDAMDWSEGCVRSDESWSCRVKDKDGFLKMSGLKLPDTTHTWVDASMTLEECKAKCIENCSCTAYTNSDTVSSSGCAIWFGALIDIREISLHADLDLYIRLAASEIAEVKDRGRSKTKMIVIIAPIVFAFVMVIIFLCIYKRRREVNDVEDSKRDIEIPFYDYVVIAIATNNFSINKKLGQGGFGPVYKGTLTDGQEIAIKQLSKTSHQGMKEFKNEVILCSKLQHQNLIKVLGCCIKGEEKMLIYEYMPNKSLDSWIFGSITQRNMLDWSKRFHIISGVAHGLLYLHQYSRLKIIHRDLKASNVLLDNEMNPKISDFGLARIFGGGQIEENTNKVVGTYGYMAPEYAYDGIFSIKSDVFSFGILLLEIVSGMKSRRLSYPNQSLNLIGHVWRLWKEGMPLKLIDACLEVSLAISEALRCIHISLLCVQHHPEDRPNMASVVMMLSSESDLPQPKEPAFLLENIPRGQESSQKNHTSSSINEISFTELHAR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0932 825 Pfam D-mannose binding lectin 84 189 IPR001480 -
Acco08g0932 825 Gene3D - 29 160 IPR036426 -
Acco08g0932 825 ProSiteProfiles EGF-like domain profile. 297 333 IPR000742 -
Acco08g0932 825 Pfam PAN-like domain 353 420 IPR003609 -
Acco08g0932 825 MobiDBLite consensus disorder prediction 796 825 - -
Acco08g0932 825 Pfam S-locus glycoprotein domain 222 331 IPR000858 GO:0048544
Acco08g0932 825 Gene3D Transferase(Phosphotransferase) domain 1 583 790 - -
Acco08g0932 825 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 21 770 - -
Acco08g0932 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 473 582 - -
Acco08g0932 825 ProSiteProfiles Protein kinase domain profile. 507 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0932 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Acco08g0932 825 ProSiteProfiles PAN/Apple domain profile. 353 436 IPR003609 -
Acco08g0932 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 194 IPR036426 -
Acco08g0932 825 Pfam Protein tyrosine and serine/threonine kinase 508 778 IPR001245 GO:0004672|GO:0006468
Acco08g0932 825 Gene3D Phosphorylase Kinase; domain 1 472 582 - -
Acco08g0932 825 Gene3D Hepatocyte Growth Factor 352 432 - -
Acco08g0932 825 Pfam Domain of unknown function (DUF3403) 780 825 IPR021820 GO:0004674
Acco08g0932 825 PIRSF SRK 5 825 IPR024171 GO:0004674
Acco08g0932 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 29 160 - -
Acco08g0932 825 SMART serkin_6 507 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0932 825 SMART blect_4 42 163 IPR001480 -
Acco08g0932 825 CDD EGF_CA 299 331 - -
Acco08g0932 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 787 - -
Acco08g0932 825 CDD PAN_AP_plant 352 436 - -
Acco08g0932 825 CDD B_lectin 50 163 IPR001480 -
Acco08g0932 825 CDD STKc_IRAK 513 779 - -
Acco08g0932 825 MobiDBLite consensus disorder prediction 799 819 - -
Acco08g0932 825 ProSiteProfiles Bulb-type lectin domain profile. 34 157 IPR001480 -
Acco08g0932 825 SUPERFAMILY Protein kinase-like (PK-like) 490 790 IPR011009 -
Acco08g0932 825 SMART ntp_6 356 435 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0932 Acco-ChrAcco08 8839377 8842525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0932 449 797 Receptor kinase-like Gene Family AT4G23230 50.847 4.39e-119 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g0932 PK_Tyr_Ser-Thr 7.3e-48 CL0016