LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco08g0931	ATGTCAAGTGATGCAGGCCAAGATCTATATATTCGCCTTGCTTCTACTGATATAGCTAAACATGAAGGTGTTAATTCATACAAGATAAAAGTAACTGCAATAACAGCTAGTGTTTTAGCACTTGGAATACTTTTGACCTTTCTCTATATTTATAAGAGCAGAAGAAAGTCCAAAGAAAATACTGATGAAGTTCTAGAAGGAGATATGGAGCTTCCTCTCTATGACTTTGCTATAATAACTAGTGCTACTCAAAACTTCTCAGATGACAATAAGCTTGGCCAAGGTGGTTTTGGACCAGTATATAAGGGAACATTAGGTGGTGGACAAGAGATTGCTGTAAAGCGACTTTCACAAAATTCTCATCAAGGAGTGAAAGAATTCCAAAACGAAGTTATGTTGTGTGCCAAACTTCAGCATCGAAATCTTGTTAAAGTTCTTGGTTGTTGCATTCAAGGAGAGGAGAAAATGCTCATTTATGAATATATGTCAAATAAGAGTTTGGATTTATTTATTTTTGGTTCTCCTACTCAAAAGAGCCTCTTATGTTGGTTCAAGCGCTTCCGCATTATATGTGGAATTGCTCGAGGACTTATGTATCTCCATCAAGATTCAAGATTAAGAATCATTCATAGAGATCTTAAAGCAAGTAACATATTATTGGACAATGAATTGAACCCAAAGATATCAGATTTTGGCTTGGCAAAGACGTTTGAAAAAGATGAAAACCAAGAAAATACAAGGAGAGTTATTGGTACATATGGTTATATGGCACCTGAATATGCTATCTACGGGTTATTCTCCATGAAATCTGATGTGTTCAGTTTTGGGGTTTTATTACTCGAGACAGTCAGTGGAATAAAAAATGGAGCATTCTCTTTGAGGAAACAAAGCGTTAATCTTATTGGGCATGCATGGAGGCTGTGGAAGGAGGGAATCCCACTTGAATTGATTGATAAACATTTGGGAGAATCATATAGTGAATCAGAAGTATTGAGATGCATCCATATTGGTCTTCTTTGTGTGCAACATCATCTTGATGATAGGCCAAATATGATATCTGTGGTTGTGATGCTAAGTAGTGAAGGTGATTTGCCTCAACCTAAAGAGCCTGATTTCCTCTTAGAAAAAATTTCAATAAGTAGTAAAACTAGCGATAACAGTTCAGCTTCAATAAATGAAATTTCCATCACCCAGTTACAGCCCAGATAG	1209	0.3623	MSSDAGQDLYIRLASTDIAKHEGVNSYKIKVTAITASVLALGILLTFLYIYKSRRKSKENTDEVLEGDMELPLYDFAIITSATQNFSDDNKLGQGGFGPVYKGTLGGGQEIAVKRLSQNSHQGVKEFQNEVMLCAKLQHRNLVKVLGCCIQGEEKMLIYEYMSNKSLDLFIFGSPTQKSLLCWFKRFRIICGIARGLMYLHQDSRLRIIHRDLKASNILLDNELNPKISDFGLAKTFEKDENQENTRRVIGTYGYMAPEYAIYGLFSMKSDVFSFGVLLLETVSGIKNGAFSLRKQSVNLIGHAWRLWKEGIPLELIDKHLGESYSESEVLRCIHIGLLCVQHHLDDRPNMISVVVMLSSEGDLPQPKEPDFLLEKISISSKTSDNSSASINEISITQLQPR	402

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco08g0931	402	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	7	382	-	-
	Acco08g0931	402	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	162	366	-	-
	Acco08g0931	402	SMART	serkin_6	86	358	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco08g0931	402	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	208	220	IPR008271	GO:0004672\|GO:0006468
	Acco08g0931	402	CDD	STKc_IRAK	92	358	-	-
	Acco08g0931	402	ProSiteProfiles	Protein kinase domain profile.	86	372	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco08g0931	402	SUPERFAMILY	Protein kinase-like (PK-like)	70	365	IPR011009	-
	Acco08g0931	402	Pfam	Protein tyrosine and serine/threonine kinase	89	288	IPR001245	GO:0004672\|GO:0006468
	Acco08g0931	402	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	50	161	-	-
	Acco08g0931	402	MobiDBLite	consensus disorder prediction	381	402	-	-
	Acco08g0931	402	Pfam	Domain of unknown function (DUF3403)	359	402	IPR021820	GO:0004674
	Acco08g0931	402	Gene3D	Transferase(Phosphotransferase) domain 1	162	368	-	-
	Acco08g0931	402	Gene3D	Phosphorylase Kinase; domain 1	48	161	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco08g0931	Acco-ChrAcco08	8799202	8801036	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco08g0931	54	402	Receptor kinase-like Gene Family	AT4G11530	53.444	1.45e-130	389

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Acco08g0931		PK_Tyr_Ser-Thr	1.1e-46	CL0016