Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0929 ATGCCAATTAAGGAAGCTTATTATGACATGCTTGTCAAGTATCGTGAGGAATTGACGAGGCCTATCCAAGAAGCCATGGATTTCATGCGCAGGATTGAAACTCAGCTCAATATGCTTTGCAATGGATCCATTCGTATCTTCTCTGTTGGAGTTGGAGATGGGCCATGGGGCATGATGAAAGAATTTGATGATAACATACCAGCCCGGGTCTTTGACAATTTCCAGTTTGTGAATTTTACTGAAATAATGTCAAAGAATATGGATCGATCCCGAAAAGAAACAGAATTTGCACTTGCTGCGCTGATGGAAATACCCTCTCAATACAAGGCAACATTGGAACTTAATATACTGGGGTATGCATGTTGA 366 0.4098 MPIKEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMLCNGSIRIFSVGVGDGPWGMMKEFDDNIPARVFDNFQFVNFTEIMSKNMDRSRKETEFALAALMEIPSQYKATLELNILGYAC 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0929 121 Pfam Copine 44 117 IPR010734 -
Acco08g0929 121 SMART KNOX2_2 5 41 IPR005541 GO:0003677|GO:0005634
Acco08g0929 121 Pfam KNOX2 domain 5 40 IPR005541 GO:0003677|GO:0005634
Acco08g0929 121 PANTHER COPINE FAMILY PROTEIN 1 43 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0929 Acco-ChrAcco08 8714322 8716436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0929 5 48 Homeobox Transcription Factor Family AT4G08150 75.000 9.90e-17 72.8