Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0926 ATGTGGTTCGGTGAGTTAATTGATATAAGGCAGGTTCCCTTTGATGACCAGGATTTATATATTCGCCTTGCTTCTCTTGAAACAGCTGAACTCGATGAAGCTAATGGAAACAACACAAAGGTGATTGCTGTAACAGTGATCACTGTGTTGGCTGTTGTGATGATTTTCACCTCGTTTTACCTTTACATCCGCAGAAGAACCTCTAGAGGAACCAAGGAAGAAGGCTCTGACGGAAATATGGAGCTAAAAACTTTGATAGCAGTAAACAATGAAGAAGGCTTTGAAGGAAATATGGAGCAACGTATATATGACCTTGCCGTAATAGCTAATGCTACTAATAACTTCTCACTAGACAACAAGCTTGGCGAAGGTGGTTTTGGTCCTGTTTATAAGGGTATATTTGTGGACAGACAAGAAATTGCAGTGAAACAGCTTTCACAAAGTTCTTTCCAAGATTCATTTATTTTTGGTTCTGAAAGTAAACCTCTTGATTGGTCCAAACGCTTTCACATTATTTGTGGAATTGCTCGGGGGCTTATGTATCTTCATCAAGATTCTAGATTAAAAATTGTTCATCGAGATCTTAAAACAAGTAACATATTATTGGATGGTGAGTTAAATCCAAAAATCTCATATTTTGGCTTGGCAAGAATATTTGGAGGAGATCAGAAAGAAGATAATACAAAGCAAATAGTTGGTACATATGGTTATATGGCTCCCGAATACGCAATTCATGGACTATTCTCAGTCAAATCTGATGTGTTCAGCTTCGGAGTATTACTGCTAGAAATAGTGAGTGGCATGAAAAACCGGGGGCCCTTCTTGCCAAACCAAAGCGTTAATCTCATTGGACACGCATGGAGGATGTGGAATGAAGGAGTCCCACTAAAGTTTGTTGATGAACATTTGGAGAAATCTTACGTTGAATCAGAAGTATTGCGGTGCATCCACATCGGTCTTCTTTGTCTACAATACCATGCTAATGACAGGCCAAACATGACATCTGTGGTTATAATGTTGAATAGTGAGGTTGTGTTGCCTGAGCCTAAAGAACCTGGTTTCCTTTTGGAAAGCGTCCCAGTTAGGGGAGAATCTTCTTACAAAAATACAAATCTATCATGTAATGAAGTATCTATCAGTTTGTTAGGAGCCAGGTAA 1158 0.3895 MWFGELIDIRQVPFDDQDLYIRLASLETAELDEANGNNTKVIAVTVITVLAVVMIFTSFYLYIRRRTSRGTKEEGSDGNMELKTLIAVNNEEGFEGNMEQRIYDLAVIANATNNFSLDNKLGEGGFGPVYKGIFVDRQEIAVKQLSQSSFQDSFIFGSESKPLDWSKRFHIICGIARGLMYLHQDSRLKIVHRDLKTSNILLDGELNPKISYFGLARIFGGDQKEDNTKQIVGTYGYMAPEYAIHGLFSVKSDVFSFGVLLLEIVSGMKNRGPFLPNQSVNLIGHAWRMWNEGVPLKFVDEHLEKSYVESEVLRCIHIGLLCLQYHANDRPNMTSVVIMLNSEVVLPEPKEPGFLLESVPVRGESSYKNTNLSCNEVSISLLGAR 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0926 385 ProSiteProfiles Protein kinase domain profile. 1 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0926 385 Pfam Domain of unknown function (DUF3403) 342 385 IPR021820 GO:0004674
Acco08g0926 385 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 145 348 - -
Acco08g0926 385 Gene3D Transferase(Phosphotransferase) domain 1 153 346 - -
Acco08g0926 385 Gene3D Transferase(Phosphotransferase) domain 1 98 152 - -
Acco08g0926 385 Pfam Protein tyrosine and serine/threonine kinase 158 337 IPR001245 GO:0004672|GO:0006468
Acco08g0926 385 SUPERFAMILY Protein kinase-like (PK-like) 99 348 IPR011009 -
Acco08g0926 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Acco08g0926 385 SMART serkin_6 115 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0926 385 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0926 Acco-ChrAcco08 8682015 8684102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0926 103 385 Receptor kinase-like Gene Family AT4G23280 52.249 9.73e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g0926 PK_Tyr_Ser-Thr 7.6e-25 CL0016