Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0923 ATGGAGCTAATAACCTTGATAGCAGGAAATAGTGAAGAAGGCTATGAAGGAAATATGGAGCAACGTATCTATGACCTTGCAGTTATAGCAAATGCTACTAATAACTTCTCATCAGAAAACAAGCTTGGGGAAGGTGGTTTTGGTCAAGTATACAGGGGTATACTCGTGGACGGACAAGAAATTGCAGTGAAACGGCTTTCACAAAGTTCTTTTCAAGGTCTTGGTGAATTCATGAATGAAGTCAGATTGTGTGCCAGGCTCCAGCATCGTAATCTAGACAAGGTTCTTGGTTGTTGCATTCAAAGAGAGGAGAAAATGCTCATTTATGAATACATGCCCAACAAGAGCCTAGATTCGTTTATTTTTGGTTCTGAAAGTAAACTTCTTGATTGGTCCAAGCGCTTTCACATTATTCGTGGAATTGCTCGGGGGCTTATGTATCTTCATCAAGATTCTAGATTAAAAATCGTCCACAGAGACCTTAAAGCAAGTAATATATTGTTGGATAGTGAATTAAATCCAAAAATCTCAGATTTTGGCTTGGCAAGAATATTTGGTGGAGATCAAAATGAAGATAACACAAAGCAAATAGTTGGTACATTTGGATATATGGCTCCTGAATATGCAATTCATGGACTTTTCTCTGTCAAATCTGATGTGTTCAGCTTTGGAGTATTGTTACTAGAAATAGTGAGTGGCATGAAAAATAGGGGGCCCTTCTTGCCAAGCCAAAGCGTTAATCTTATCGGACATGCATGGAGGTTTGGGAAACGTTGA 777 0.3887 MELITLIAGNSEEGYEGNMEQRIYDLAVIANATNNFSSENKLGEGGFGQVYRGILVDGQEIAVKRLSQSSFQGLGEFMNEVRLCARLQHRNLDKVLGCCIQREEKMLIYEYMPNKSLDSFIFGSESKLLDWSKRFHIIRGIARGLMYLHQDSRLKIVHRDLKASNILLDSELNPKISDFGLARIFGGDQNEDNTKQIVGTFGYMAPEYAIHGLFSVKSDVFSFGVLLLEIVSGMKNRGPFLPSQSVNLIGHAWRFGKR 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0923 258 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 5 111 - -
Acco08g0923 258 ProSitePatterns Protein kinases ATP-binding region signature. 42 64 IPR017441 GO:0005524
Acco08g0923 258 Gene3D Phosphorylase Kinase; domain 1 11 111 - -
Acco08g0923 258 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Acco08g0923 258 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 253 - -
Acco08g0923 258 ProSiteProfiles Protein kinase domain profile. 36 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0923 258 SUPERFAMILY Protein kinase-like (PK-like) 19 239 IPR011009 -
Acco08g0923 258 SMART serkin_6 36 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0923 258 Pfam Protein tyrosine and serine/threonine kinase 39 235 IPR001245 GO:0004672|GO:0006468
Acco08g0923 258 Gene3D Transferase(Phosphotransferase) domain 1 112 257 - -
Acco08g0923 258 FunFam Lectin-domain containing receptor kinase A4.3 112 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0923 Acco-ChrAcco08 8625989 8627720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0923 13 255 Receptor kinase-like Gene Family AT4G23230 60.246 6.12e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g0923 PK_Tyr_Ser-Thr 3.4e-48 CL0016