Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0920 ATGGCTATCGTTCCTTATTTGCTTGTTCTTCCCAATCTGCTTTTGTTCTTCTCCAGATTTTCTTTTGCGACTGATACCCTTTCCCAGTTCGAATCTCTTCGCGATGGCCAGACCTTGGTTTCTGAAAATGAACTCTTTGAATTGGGTTTCTTCAGCCCAGGCAGTTCGACAGACCGCTATGTTGGCATCTGGTACCACAAAATCCCTGGAAGAACTGTTGTTTGGGTTGCCAACCGAGACAGACCCATCAAAAACAACTTTGGCCAGTTGAGCTTAAACACAGAGGGAGATCTTGTACTTCTTAGCCATGATGAGACTCTTGTTTGGTCAGCAAATTCAACAATAAAGATCTTGAGTCCAATTGTGCAGCTGTTAGGCTCTGGAAACTTGGTTCTGAGAGATGGGAAGGATCAAAAGCCCCAAAACTACTTGTGGCAAAGCTTTGACTATCCTTCTGATACGATTTTGCCAGGAATGAAGCTTGGATGGGACCTGAGAACTGGTCTTAACCGACGTTATACAGCATGGAAGAATTGGGACGACCCTTCTTATGGAGACTATTCAGCGGAGCTTGTACTACACAATTATCCTGATTTAATAAGTTCGCAGGGCCGAATAGGGCATATGAGGAGTGGCCCATGGAATGGAGTCCGGTTCAGTGGCATCTCTCATGCGACGAGCAATCCACTGTATAAAATAAAGTTTGTCTGGAATAAAGATGAGGTTTATTCAACGCATACTCTCATAAATGAGTCACTGATTGCAAGAATTGTCTTCAACCAAACATTATATTCACTACTGGACATGTTATGGAGTGAAAATGATCAAAGGTGGATTACTTATAGTTTCGCGCCAATGGATAATTGTGATAGATATAATCGTTGTGGTCCTAATGGAAACTGCGTCCTGGGTGAGACACCAATATGCCAATGCTTGCCAGGATTCTTGCCAAAATCACCCAGAAATTGGAACGCTTTGGACTGGGCTGATGGATGCACCCGCAATAAGTCTTGGAGTTGCCAGGCAAAAAACAGGGATTATTTTGTCAAATTTAGCGGGCTGAAAGTTCCAGATACAGCATACTCTTGGGTTAATACAAGTATGACACTTGAGGAATGCAAAGCCAAATGCTGGGAAAATTGTTCTTGTAATGCTTATTCTAATTCAGATATCAGGGAAGGAGGTAGTGGTTGTGTTATGTGGTTTGGTGATTTAGTTGATATAAGGCAAGTTCCCTTTGATGACCAACTTTTATATGTTCGCCTTGCTTCTCCAAAAACAGCTGAACAGGATGAAGCCAACGGAAATAAGACAAAGGTGATTGCTGCAACAGTGACCACTGTATTGGCTGTTGTGATGCTTCTCACTGTGTTTTACATTTACATGCGCAGAAGAAACTCTATAGCAAACAAGGCAGAAAGGTCTGATGGAAATATGGAGCTAAAAACCTTGATAGCAGGAAACAATGAAGAAGGCTATGAAGGAAATATGGAGCAACGTATCTATGACCTTGCAGTCATAGCAAATGCTACTAATAACTTCTCATCAAAAAACAAGCTTGGCAAAGGTGGTTTTGGTTCTGTATACAGGGGTATACTCGTGGACGGACAAGAAATTGCAGTGAAACGTCTTTCTCAAAGTTCTTTCCAAGGTCTTAGCGAATTCATGAATGAAGTTAGATTGTGTGCGAGGCTTCAACACCGTAATCTGGTCAAGGTTCTTGGTTGTTGCATTCAAGGAGAGGAGAAAATGCTCATTTATGAATACATGCCCAACAAGAGCCTAGATTTGTTTATTTTTGGTTGTGAAAGTAAACTTCTTGATTGGTCCAAGCGCTTTCACATTATTCGTGGAATTGCTCGGGGGCTTATGTATCTTCATCAAGATTCTAGATTAAAAATCGTCCATAGAGACCTTAAAGCAAGTAATATATTATTGGATAGTGAATTAAATCCAAAAATCTCAGATTTCGGGTTGGCAAGAATATTTGGTGGAGATCAAAATGAAGATAACACAAAGCAAATAGTTGGTACATTTGGATATATGGCTCCTGAATACGCAATTCATGGGCTCTTCTCCGTCAAATCTGATGTGTTCAGCTTTGGAGTATTGCTGTTAGAAATAGTGAGTGGCAAGAAAAACAGGGGGCCCTTCTTGCCAAGCCAAAGTGTTAATCTTATCGGACATGCATGGAGGTTGTGGAATGAGGGACTCCCACTAAAATTCACCAATGAACATTTGGAGAGCTCTTACATTGAATCAGAAGTACTGCGATGTATTCACATTGGTCTTCTTTGTTTGCAGTACCATGTTGATGATAGGCCAGACATGACATCTGTAGTAATAATGTTGAATAGTGAAGGTGTGTTGCCTGAGCCTAGAGAACCTGGTTTCCTTTTGGAAAGCATCCCAATTAGGGGAGAATCTTCTAACAATAATACAACTCCATCAAGTAATGAAGTATCTATCACTTTGTTAGAAGCCAGGTAA 2490 0.4104 MAIVPYLLVLPNLLLFFSRFSFATDTLSQFESLRDGQTLVSENELFELGFFSPGSSTDRYVGIWYHKIPGRTVVWVANRDRPIKNNFGQLSLNTEGDLVLLSHDETLVWSANSTIKILSPIVQLLGSGNLVLRDGKDQKPQNYLWQSFDYPSDTILPGMKLGWDLRTGLNRRYTAWKNWDDPSYGDYSAELVLHNYPDLISSQGRIGHMRSGPWNGVRFSGISHATSNPLYKIKFVWNKDEVYSTHTLINESLIARIVFNQTLYSLLDMLWSENDQRWITYSFAPMDNCDRYNRCGPNGNCVLGETPICQCLPGFLPKSPRNWNALDWADGCTRNKSWSCQAKNRDYFVKFSGLKVPDTAYSWVNTSMTLEECKAKCWENCSCNAYSNSDIREGGSGCVMWFGDLVDIRQVPFDDQLLYVRLASPKTAEQDEANGNKTKVIAATVTTVLAVVMLLTVFYIYMRRRNSIANKAERSDGNMELKTLIAGNNEEGYEGNMEQRIYDLAVIANATNNFSSKNKLGKGGFGSVYRGILVDGQEIAVKRLSQSSFQGLSEFMNEVRLCARLQHRNLVKVLGCCIQGEEKMLIYEYMPNKSLDLFIFGCESKLLDWSKRFHIIRGIARGLMYLHQDSRLKIVHRDLKASNILLDSELNPKISDFGLARIFGGDQNEDNTKQIVGTFGYMAPEYAIHGLFSVKSDVFSFGVLLLEIVSGKKNRGPFLPSQSVNLIGHAWRLWNEGLPLKFTNEHLESSYIESEVLRCIHIGLLCLQYHVDDRPDMTSVVIMLNSEGVLPEPREPGFLLESIPIRGESSNNNTTPSSNEVSITLLEAR 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0920 829 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Acco08g0920 829 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Acco08g0920 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 479 589 - -
Acco08g0920 829 CDD B_lectin 31 151 IPR001480 -
Acco08g0920 829 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Acco08g0920 829 Gene3D Hepatocyte Growth Factor 339 422 - -
Acco08g0920 829 CDD STKc_IRAK 520 785 - -
Acco08g0920 829 SMART blect_4 30 151 IPR001480 -
Acco08g0920 829 PIRSF SRK 1 829 IPR024171 GO:0004674
Acco08g0920 829 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 775 - -
Acco08g0920 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Acco08g0920 829 SUPERFAMILY Protein kinase-like (PK-like) 500 801 IPR011009 -
Acco08g0920 829 Pfam D-mannose binding lectin 72 177 IPR001480 -
Acco08g0920 829 SMART ntp_6 343 422 IPR003609 -
Acco08g0920 829 Pfam PAN-like domain 340 408 IPR003609 -
Acco08g0920 829 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Acco08g0920 829 Pfam Protein tyrosine and serine/threonine kinase 516 726 IPR001245 GO:0004672|GO:0006468
Acco08g0920 829 SMART serkin_6 514 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0920 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 148 - -
Acco08g0920 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Acco08g0920 829 CDD PAN_AP_plant 339 423 - -
Acco08g0920 829 MobiDBLite consensus disorder prediction 806 829 - -
Acco08g0920 829 ProSiteProfiles PAN/Apple domain profile. 340 424 IPR003609 -
Acco08g0920 829 Gene3D - 19 148 IPR036426 -
Acco08g0920 829 Gene3D Phosphorylase Kinase; domain 1 482 589 - -
Acco08g0920 829 Gene3D Transferase(Phosphotransferase) domain 1 590 789 - -
Acco08g0920 829 CDD TM_EGFR-like 434 471 - -
Acco08g0920 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 590 792 - -
Acco08g0920 829 ProSiteProfiles Protein kinase domain profile. 514 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0920 829 CDD EGF_CA 287 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0920 Acco-ChrAcco08 8579504 8582681 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0920 428 802 Receptor kinase-like Gene Family AT4G23190 48.964 5.59e-122 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g0920 PK_Tyr_Ser-Thr 3.5e-48 CL0016