Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0919 ATGGCCAGACCTTGGTTTCTGAAAATGAAGTCTTTGAAATGGGTTTCTTCAGCCCAGGGCGAAAGGGAGTATGTGAGGAGTGGCCCCTGGAATGGTGTCCGGTACAGTGGCGTGTCTCATGCGACGAGCAATCCACTGTATAAAGCAAAGTTTGTCTGGAATAAAGATGAGGTTTATTCAATGCCTACTCTCGTAGATGAGTCACAGATTGCAAGAATTGTCTTCAACCGAACATTATACTCACTACTGGACATAATATGGAGTGAAAATGATCAAAGGTGGATTACCTATAGTTTTGTGCCAATGGATAATTGTGATAGATATAATCGTTGTGGTCCTAATGGAAACTGCGTCCTGGGTGAGACACCAATATGCCAGTGCTTGCCAGGATTCTTGCCAAAATCACCCAGAAATTGGAATGCTTTGGACTGGGCTGATGGATGCATCCGCAATAAATCTTGGAGTTGCCAGGCAAAAAACAGGGATTATTTTGTCAAGTTTAGTGGGCTGAAATTTCCAGATACAACACACTCTTGGGTTAATAAAAGTATGACACTTGAGGAATGCAAAGCCAAATGTTGGGAAAATTGTTCTTGTAATGCTTATTCTAATTCAGATATCACGGATGGAGGTAGTGGCTGTGTTTTGTGGTTTGGTGATTTAGTTGATCTAAGGCAGGTTCCGTTTGATGACCAACATTTATATATTCGTCTTGCTTCCCAAGAAACAGCTGAACATGGTGAAACTAAAGGAAATAAGACAAAGGTGATTGCTGCAACAGTGACCACTGCATTGGCTGTTGTGATGCTTCTCACTGTGTTTTACATTTACATGCGCAGAAGAAACTCTATAGCAAACAAGGATGGAGGCTCTGATGAAAATATGGAGCTGAAAACCTTGATCGGTGTAAACAATGAAGAAGGCTATGAAGGAAATATGGAGCAACGTATTTATGACCTTGCGGTGATAGTTAATGCAACTAATAACTTTTCATCAGACAACAAGCTTGGCCAAGGTGGCTTTGGTCATGTATACAAGGGTATACTTGTTGACGGACAAGAAATTGCAGTGAAACGGCTTTCACAAAGTTCTTTCCAAGGTGTTAGTGAATTCATGAATGAAGTCAAATTATGTGCCAAACTTCAGCATCGTAATCTTGTCAAGGTTCTTGGTTGTTGCATACAAGGAGGGGAGAAAATGCTCATATATGAATACATGCCCAACAAGAGCTTAGATTCATTTATTTTTGGTTCTAAAAGTAAACTTCTTGATTGGTCCAAGCGCTTTCACATTATCCGCGGGATTGCTCGGGGGCTTATGTATCTTCATCAAGATTCTAGATTAAAAATCGTCCATAGAGATCTTAAAGCAAGTAATATATTATTGGATAATGAATTAAATCCAAAAATCTCAGATTTTGGCTTGGCAAGAATATTTGGAGGAAATCAGAATGAAGATAACACAAGGCAAATAGTTGGTACATATGGTTATATGGCTCCTGAATATGCAATTCATGGCCTATTCTCCGTCAAATCTGACGTGTTCAGCTTCGGAGTATTACTGTTAGAAATAGTGAGTGGCATGAAAAATAGGGGCTCCTTTTTGTCAAGCCAAAGCATTAATCTCATTGGACATGCATGGAGGTTGTGGAATGAGAGAGTTCCACTAAAATTTGCCGAAGAACATTTGGAGAGGTCTTATGTTGAATCAGAAGTATTGCGATGCATCCATGTCAGTCTTCTTTGTTTGCAATACTATGCTGATGATAGGCCAGGCATGACATCAGTGGTTATAATGTTAAGTAGTGATGGTGTGTTGCCTGAGCCTAAAGAACCTGGTTTCCTTTTGGAAAACATCCCACGTAGGTTAGAATCTCTTAACAATAATGCAAATCCTTCAAGTAATGACTTATCTATCACTTTGTTAGAAGCCAGGTAA 1938 0.3973 MARPWFLKMKSLKWVSSAQGEREYVRSGPWNGVRYSGVSHATSNPLYKAKFVWNKDEVYSMPTLVDESQIARIVFNRTLYSLLDIIWSENDQRWITYSFVPMDNCDRYNRCGPNGNCVLGETPICQCLPGFLPKSPRNWNALDWADGCIRNKSWSCQAKNRDYFVKFSGLKFPDTTHSWVNKSMTLEECKAKCWENCSCNAYSNSDITDGGSGCVLWFGDLVDLRQVPFDDQHLYIRLASQETAEHGETKGNKTKVIAATVTTALAVVMLLTVFYIYMRRRNSIANKDGGSDENMELKTLIGVNNEEGYEGNMEQRIYDLAVIVNATNNFSSDNKLGQGGFGHVYKGILVDGQEIAVKRLSQSSFQGVSEFMNEVKLCAKLQHRNLVKVLGCCIQGGEKMLIYEYMPNKSLDSFIFGSKSKLLDWSKRFHIIRGIARGLMYLHQDSRLKIVHRDLKASNILLDNELNPKISDFGLARIFGGNQNEDNTRQIVGTYGYMAPEYAIHGLFSVKSDVFSFGVLLLEIVSGMKNRGSFLSSQSINLIGHAWRLWNERVPLKFAEEHLERSYVESEVLRCIHVSLLCLQYYADDRPGMTSVVIMLSSDGVLPEPKEPGFLLENIPRRLESLNNNANPSSNDLSITLLEAR 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0919 645 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Acco08g0919 645 SMART serkin_6 330 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0919 645 Gene3D Phosphorylase Kinase; domain 1 298 405 - -
Acco08g0919 645 CDD PAN_AP_plant 155 239 - -
Acco08g0919 645 Pfam S-locus glycoprotein domain 26 135 IPR000858 GO:0048544
Acco08g0919 645 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 295 405 - -
Acco08g0919 645 CDD EGF_CA 103 131 - -
Acco08g0919 645 Pfam PAN-like domain 156 224 IPR003609 -
Acco08g0919 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Acco08g0919 645 SUPERFAMILY Protein kinase-like (PK-like) 316 621 IPR011009 -
Acco08g0919 645 SMART ntp_6 159 238 IPR003609 -
Acco08g0919 645 Pfam Protein tyrosine and serine/threonine kinase 333 542 IPR001245 GO:0004672|GO:0006468
Acco08g0919 645 CDD TM_EGFR-like 250 287 - -
Acco08g0919 645 CDD STKc_IRAK 336 600 - -
Acco08g0919 645 ProSiteProfiles Protein kinase domain profile. 330 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0919 645 Gene3D Hepatocyte Growth Factor 155 238 - -
Acco08g0919 645 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 155 238 - -
Acco08g0919 645 ProSiteProfiles EGF-like domain profile. 101 137 IPR000742 -
Acco08g0919 645 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 406 608 - -
Acco08g0919 645 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 74 625 - -
Acco08g0919 645 Gene3D Transferase(Phosphotransferase) domain 1 406 605 - -
Acco08g0919 645 ProSiteProfiles PAN/Apple domain profile. 156 240 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0919 Acco-ChrAcco08 8558588 8561737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0919 244 645 Receptor kinase-like Gene Family AT4G05200 47.470 1.04e-123 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g0919 PK_Tyr_Ser-Thr 3.2e-49 CL0016