Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0916 ATGTGGAAGGGAGACGAAGAGTATTATAGAAGTGGTCCTTGGAATGGACTTATTTTCAGTGGCAAAACCACACCAATCTTTGACCTTCACTTGGTCTCTAATCAAGATGAGGTGGTTTACACTTCCAAGCTCCAGAACAAATCGGTGATAACAAGGGTTATATTGAACGGAACTACTTCATATCGTCAGCGCTATAACTGGGTTGACCAAACTAAAAGCTGGAGGCTTTATTCATCTGTGCCCAGAGATAATTGCGACAACTACAATCTCTGTGGCCCCTATGGAAATTGTGTTGTTAATGACTCTCCTCCCTGCCAGTGTCTCTCAGGGTTTGAGCCAAAATCACCCCAAAACTACAATGCTTTGGACTGGACCCAGGGATGTGTTCGCAGTGAAATGTGGAGCTGTGGGGTCAAAAATAGAGATGGCTTTCGAAGATTCGGTGGGTTGAAAATGCCAGATACTAGAAAAGCTTGGGTTAATTCAAGCATGACACTTGAGGATTGCAGGACGAAATGCTTGGCAAATTGTTCTTGTACTGCTTATGCGAGCTTGTATGTTACTGGGGGAGGTATTGGGTGTTTGATTTGGTTTGGTGAGCTTATTGATCTGAGAGTGGCTTCCACTCCTGGGCAAGATCTATATATCCGAATGGCTACCTCTGAGACTGATGCAAAAAAGCACAAGAAAATGGCGGGGATTGTGGTGATAGCAGTTACAGTTCCATTGGTTGCTCTGGCACTTTTGGCCTTCTCTTGCACTCATTGGAGGAAAAGAAAGCGTAGAGTCGATACAGAGAAAACCTCCATACAGAACAACAATGAAGGTCAACAAGAGGACTTAGACCTTCCGTTCTACGACCTTGCTACAATTGTTCATGCCACTAATGACTTCTCAAATAACCTGAAGCTTGGCCAAGGTGGTTTTGGACCAGTATATAGGGGTATTTTAGCAGATGGACAAGAGATTGCTGTCAAGAGGCTATCGCGGAGTTCTGGACAAGGAATAAAAGAATTTAAGAATGAAGTGTCGTTGTGTGCGAAACTTCAACACCGAAATCTTGTGAAGGTTCTTGGTTGTTGCATCCAAGGGGAAGAGAAGATGCTTATCTATGAATACATGCCCAACAAAAGCCTAGATAGCTTTTTATTTGATTCCAGGCAGAACAAATTCCTAGACTGGCCAAGGCGCTTTCATATCATATTCGGAATTGCTCGAGGGCTTCTCTATCTTCATCAAGATTCTAGATTACGGATCATACATAGAGATCTTAAAGCAAGTAATATTTTGTTAGATAGGGAGATGAACCCAAAAATTTCAGATTTTGGCATGGCAAGAATGTTTGGTGGTGATCAAATTGAAGGGAATACAAATAGAATAGCTGGTACCTATGGTTATATGTCACCAGAATATGCCATTCATGGGCTATTCTCTATTAAATCTGATGTATTTAGCTTTGGTGTGTTACTATTGGAAATAGTAAGTGGAAAGAAAAACCGAGGAGCTTCATATCCAAACCAGGGTTTTAACCTTATTGGACAAGTATGGAGATTGTGGAAGGAGAGCAACCCATTGGAATTGGTTGATGGCTGTTTGGGGGAAGCTTTTAACATATCAGAAGCGCTGCGTTGTATTCAGGTTGGTCTTCTGTGTGTGCAAGTTCATCCTGAGGATAGGCCAAACATGGCCTCAGTAATTGTGATGTTGAGCAGTGAGAATGTGTTGCCTGAGCCTAAGGAACCTGGTTTCTTGATTGAGAGGATTATGGTGGGAGAAGAATGTGCTTCTTCTGGCAACCAGATATCTTCTTCAACTAATGAAGTAACTATGACTCAGTTAGAGGCCAGATAA 1851 0.4225 MWKGDEEYYRSGPWNGLIFSGKTTPIFDLHLVSNQDEVVYTSKLQNKSVITRVILNGTTSYRQRYNWVDQTKSWRLYSSVPRDNCDNYNLCGPYGNCVVNDSPPCQCLSGFEPKSPQNYNALDWTQGCVRSEMWSCGVKNRDGFRRFGGLKMPDTRKAWVNSSMTLEDCRTKCLANCSCTAYASLYVTGGGIGCLIWFGELIDLRVASTPGQDLYIRMATSETDAKKHKKMAGIVVIAVTVPLVALALLAFSCTHWRKRKRRVDTEKTSIQNNNEGQQEDLDLPFYDLATIVHATNDFSNNLKLGQGGFGPVYRGILADGQEIAVKRLSRSSGQGIKEFKNEVSLCAKLQHRNLVKVLGCCIQGEEKMLIYEYMPNKSLDSFLFDSRQNKFLDWPRRFHIIFGIARGLLYLHQDSRLRIIHRDLKASNILLDREMNPKISDFGMARMFGGDQIEGNTNRIAGTYGYMSPEYAIHGLFSIKSDVFSFGVLLLEIVSGKKNRGASYPNQGFNLIGQVWRLWKESNPLELVDGCLGEAFNISEALRCIQVGLLCVQVHPEDRPNMASVIVMLSSENVLPEPKEPGFLIERIMVGEECASSGNQISSSTNEVTMTQLEAR 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0916 616 CDD STKc_IRAK 304 569 - -
Acco08g0916 616 SMART serkin_6 298 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0916 616 Pfam S-locus glycoprotein domain 9 115 IPR000858 GO:0048544
Acco08g0916 616 Pfam Protein tyrosine and serine/threonine kinase 302 566 IPR001245 GO:0004672|GO:0006468
Acco08g0916 616 SMART ntp_6 139 218 IPR003609 -
Acco08g0916 616 Gene3D Transferase(Phosphotransferase) domain 1 374 577 - -
Acco08g0916 616 Pfam Domain of unknown function (DUF3403) 570 616 IPR021820 GO:0004674
Acco08g0916 616 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 374 577 - -
Acco08g0916 616 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 70 599 - -
Acco08g0916 616 CDD PAN_AP_plant 135 219 - -
Acco08g0916 616 Pfam PAN-like domain 136 204 IPR003609 -
Acco08g0916 616 MobiDBLite consensus disorder prediction 597 616 - -
Acco08g0916 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Acco08g0916 616 ProSiteProfiles EGF-like domain profile. 81 117 IPR000742 -
Acco08g0916 616 Gene3D Phosphorylase Kinase; domain 1 255 373 - -
Acco08g0916 616 SUPERFAMILY Protein kinase-like (PK-like) 282 577 IPR011009 -
Acco08g0916 616 ProSiteProfiles PAN/Apple domain profile. 136 219 IPR003609 -
Acco08g0916 616 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 262 373 - -
Acco08g0916 616 ProSiteProfiles Protein kinase domain profile. 298 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0916 Acco-ChrAcco08 8498113 8502469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0916 229 584 Receptor kinase-like Gene Family AT4G23190 55.220 6.59e-134 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g0916 PK_Tyr_Ser-Thr 2.6e-47 CL0016