Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0915 ATGGATTACCCGCGTAGAAGTCAAAACGATGTCGTCCAATCTTTCCCATTTTCATCATTCACATTACAATCTGTTGATTTGGAGATGCGGGTGACACCTGCAACTTGCAATGGAACTGACCTCGAAGCTTCCCGCGTTAATGGAGCCTGTGACGTTGCGTTTTTGGGAACAACGGCACTGGAGTGGGGTTCCCAGTTCACTAGGCGGCTTCTTCTTCTTGTGCAAAGAGATACCAGCTATGACAATTTAACTTTCCCTTATTCGACCTCCTATGTATATTTTCCTTGGTCCATTGAGAGATCTAGAAATCAACCCAAAGGAATGGCCATTTTTTCTCTTATACTTGCTGTTATGAAACTGCTATTAATATTCCCTCCCTTTTCTTCTGCATCTGATGTTATTACCCATGATCATCCACTCCCTGATGGAAGGACCTTGGTTTCTAAATATGGGATCTTTGAACTGGGCTTCTTCAGCATAGGTAGTTCCACAAACCGTTATGTTGGAATATGGTACGAGAGCATCTCACCGAAAACTGTTGTTTGGGTGGCCAACCGTGAAAAACCAGTTAAAGACAACTCAAGTGTGTTGAGCATAAACACAAAGGGACGTCTCGTACTTCTCAGCCAGAACCAGACTATTGTTTGGTCAGCAAACTCAACAATACAAGGCCTGAATCCCATTGCGCAGCTTCTAGACTCTGGAAACCTTGTACTGAGAAATGAACAAGACCAGAATCCTCAAAACTACCTATGGCAGAGTTTTGATTATCCATCTGATACATTTTTACCAGGAATGAAGATTGGGTGGGACCTGAAAACTGGGCTAAATCGACGCCTAATAGCATGGAGGAACTGGGATGACCCTTCTCCTGGAGACTTCACTTGTGGTATTACACTTCATGCTACTCCTGAGCTAGTAATGTGGAAGGGCTCAGAAGAAATCCAAAGAAGTAGCCCTTGGAACGGAGTCTGGATTGGTGCTAAACCCACTCCACTTTTCCAGCTGCAATTTGTTGTCAATGAAGATGAGGTGGTTTACACTTCTAATCTCCAGGACAAATCTGTGACTACAAGAGTTGTTCTAAACCAAACTGTCTATTCTCGTCAGCGTTACATCTGGGTTGAACAAACTAAAAGTTGGATGATTTATTCATCTGTACCAATTGATAAATGTGACAGTTATAATTCTTGTGGCCCCAATGGAAATTGTATTGTGAGTGAGTCACCACGTTGCCAGTGTTTAACAGGATTCAAACCAAAATCACCTAAAAAATATGATGCATTGGACTGGGCTCAGGGCTGTGTGCGCAGTGAACCATGGCACTGCAGGGTCAAAGATAAAGATGGTTTTAAAAAATTTAGTGGGTTGAAATTGCCAGATACAAGAACATCTTGGGTTAACGCAAGTATGACACTTTGGGAGTGCAAGGCTAAATGCTGGGAAAATTGTTCCTGCAACGCTTATGCAAACTTGTACATTACTGGAGGAGGTAGTGGTTGTATCCTTTGGTTTGGTGATCTTATTGATTTGAGAGTGGTTACTGTCCCTGTGCAAGATCTTTTTATTCGATTGGCTTATTCTGATGTTGTACTAGAAGATGCAGAAAAGCATGAAAAAAAGGTGGTTGTGCTAACAACAGTTACTTTTACCCTGGTTCTCTTGATGCTTTTGGCTTTCTTTTCGATTCATAGGATGAATAGAAAACGAAGAGAGAAAATTTTGACCGAGGATGGTCATGAAGGAGAGCAAGAAGACATAGAGCTGCCTTTATTTGACATTGCTACAGTTATTCGTGCCACTAACAATTTCTCAAGTCACAAGAAGCTTGGCCAAGGTGGTTTTGGATCTGTATACAGGGGTACACTTGAAGATGGGAAAGAGATTGCTGTCAAAAGGTTATCAGAGGGATCTAGACAAGGGTTGAAGGAATTTAAGAATGAAGTAATAATGTGTGCGAAACTTCAACACCGGAATCTTGTTAAGGTTCTTGGCTGTTGCATTCAAAGAGAGGAGAAAATGCTCATCTATGAATATATGCCCAACAAAAGTTTAGATTCTATTCTTTTTGATTTTCGCCAAAGTGAATCTCTGAATTGGCCACAGCGGTTTCACATTATTTTTGGAATTGCTCGGGGACTTGTCTATCTTCATCAAGATTCTCGATTTAGGGTTATACATAGAGATCTTAAAGCAAGCAACGTTTTGTTAGATGAGGATTTAAATCCAAAAATTTCAGATTTTGGCATTGCAAGAATGTTTGGAGGAGACCAAATGGAAGGAAATACAAAGAAAGTGATCGGTACATATGGTTATATGGCACCAGAATATGCCGTTCATGGGATATTTTCAATAAAATCTGATGTGTTCAGCTTTGGCATATTACTTCTAGAAATAATAAGTGGAAAGAGAAACCGAGGGGCTTCCTATCCAAACTATGGTTTTAACCTTATCAGCCATGCTTGGAGACTATGGAAGGAGGGTAACACAAAAGAATTAATAGATGCTTGTTTGGGGGACAATTTTAATTTATCAGAATTATTAAGGTGCATCCATGTGGCTCTTCTGTGTGTACAGCTGCGTCCTGATGATAGGCCAAACATGGCATTAGTATTAGTAATGTTGAGCAGTGAGAATGCCTTGCCGGAGCCAAAGGAGCCTGGTTTCTTATTAGAAAGACCTTCAGCTGAAGGAGATTATTATTCAAGCAATGAAATAACTTGGACTCTGCTACAGGCCAGATAG 2745 0.4084 MDYPRRSQNDVVQSFPFSSFTLQSVDLEMRVTPATCNGTDLEASRVNGACDVAFLGTTALEWGSQFTRRLLLLVQRDTSYDNLTFPYSTSYVYFPWSIERSRNQPKGMAIFSLILAVMKLLLIFPPFSSASDVITHDHPLPDGRTLVSKYGIFELGFFSIGSSTNRYVGIWYESISPKTVVWVANREKPVKDNSSVLSINTKGRLVLLSQNQTIVWSANSTIQGLNPIAQLLDSGNLVLRNEQDQNPQNYLWQSFDYPSDTFLPGMKIGWDLKTGLNRRLIAWRNWDDPSPGDFTCGITLHATPELVMWKGSEEIQRSSPWNGVWIGAKPTPLFQLQFVVNEDEVVYTSNLQDKSVTTRVVLNQTVYSRQRYIWVEQTKSWMIYSSVPIDKCDSYNSCGPNGNCIVSESPRCQCLTGFKPKSPKKYDALDWAQGCVRSEPWHCRVKDKDGFKKFSGLKLPDTRTSWVNASMTLWECKAKCWENCSCNAYANLYITGGGSGCILWFGDLIDLRVVTVPVQDLFIRLAYSDVVLEDAEKHEKKVVVLTTVTFTLVLLMLLAFFSIHRMNRKRREKILTEDGHEGEQEDIELPLFDIATVIRATNNFSSHKKLGQGGFGSVYRGTLEDGKEIAVKRLSEGSRQGLKEFKNEVIMCAKLQHRNLVKVLGCCIQREEKMLIYEYMPNKSLDSILFDFRQSESLNWPQRFHIIFGIARGLVYLHQDSRFRVIHRDLKASNVLLDEDLNPKISDFGIARMFGGDQMEGNTKKVIGTYGYMAPEYAVHGIFSIKSDVFSFGILLLEIISGKRNRGASYPNYGFNLISHAWRLWKEGNTKELIDACLGDNFNLSELLRCIHVALLCVQLRPDDRPNMALVLVMLSSENALPEPKEPGFLLERPSAEGDYYSSNEITWTLLQAR 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0915 914 SMART ntp_6 446 525 IPR003609 -
Acco08g0915 914 ProSiteProfiles EGF-like domain profile. 388 424 IPR000742 -
Acco08g0915 914 SUPERFAMILY alpha-D-mannose-specific plant lectins 180 289 IPR036426 -
Acco08g0915 914 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 127 255 - -
Acco08g0915 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 725 737 IPR008271 GO:0004672|GO:0006468
Acco08g0915 914 PIRSF SRK 104 914 IPR024171 GO:0004674
Acco08g0915 914 ProSiteProfiles Bulb-type lectin domain profile. 131 252 IPR001480 -
Acco08g0915 914 CDD STKc_IRAK 610 875 - -
Acco08g0915 914 Gene3D - 127 255 IPR036426 -
Acco08g0915 914 ProSitePatterns Protein kinases ATP-binding region signature. 610 632 IPR017441 GO:0005524
Acco08g0915 914 Pfam PAN-like domain 443 511 IPR003609 -
Acco08g0915 914 SUPERFAMILY Protein kinase-like (PK-like) 588 875 IPR011009 -
Acco08g0915 914 CDD B_lectin 137 258 IPR001480 -
Acco08g0915 914 Pfam D-mannose binding lectin 179 284 IPR001480 -
Acco08g0915 914 Pfam S-locus glycoprotein domain 317 422 IPR000858 GO:0048544
Acco08g0915 914 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 119 862 - -
Acco08g0915 914 ProSiteProfiles Protein kinase domain profile. 604 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0915 914 CDD PAN_AP_plant 446 526 - -
Acco08g0915 914 ProSiteProfiles PAN/Apple domain profile. 443 526 IPR003609 -
Acco08g0915 914 Gene3D Transferase(Phosphotransferase) domain 1 680 884 - -
Acco08g0915 914 Pfam Protein tyrosine and serine/threonine kinase 606 810 IPR001245 GO:0004672|GO:0006468
Acco08g0915 914 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 680 883 - -
Acco08g0915 914 SMART serkin_6 604 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0915 914 Gene3D Phosphorylase Kinase; domain 1 564 679 - -
Acco08g0915 914 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 567 679 - -
Acco08g0915 914 SMART blect_4 137 258 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0915 Acco-ChrAcco08 8473538 8478209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0915 542 889 Receptor kinase-like Gene Family AT4G23230 51.289 1.20e-121 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g0915 PK_Tyr_Ser-Thr 1.4e-48 CL0016