Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0914 ATGATCCATGGAAAGAACCCCAAAGTTCAACCAATGGACACTTTGTGTTTCATGAACATCGTTGCTTATGCTCTTCTTATCTCTGGTTTCAAAGCTTCCATGGCAGTTAGTTCGATTGGGGAAGAACTTCAGAGCAAGAAGAAGCTGACAATAATAATTGTCTCAACCTTGGGTGCAGTTTCCGTAGTGCTTTTACTAGGCTTTTGTGGTTATATCTACCAAGCCCAGAGAAAGAGGAAGATGACTGAGAATCCAAATGACAATGAAGGAGATCAAAACAGGGGAGAAAGTGTAGATGATCTGGATCTCCCACTGCTAGACTTTTCAACAATAGTTGTTGCCACCGATAACTTCTCATCAGAGAACAAGATTGGAGAAGGAGGTTTTGGACCTGTATATAGGGGGAAATTAGCACATGGGCAAGAGGTTGCTGTTAAGAGGCTTTCAGGAAGCTCAAGGCAAGGAATAACTGAGTTCAAGAATGAAGTAAAATTGATTGCGAAACTCCAACACCGGAATCTTGTAAAACTTTTTAGTTGTTGCATCCAAGGAAATAACAAAATGCTGGTGTATGAATACATGCCTAATTCCAGCTTGGATTGTTTCATTTTTGATGATACCAAGAGTAAGAGGCTAGATTGGCCTAAACGATTCCACATTATTTGTGGAATTGCTCGGGGTCTTGTTTATCTACATCAAGATTCTAGGCTGAGGATTATTCATCGAGATCTCAAACCAAGTAATGTTTTACTCGATGACAAGTTAAACCCAAAGATATCAGACTTTGGCATAGCTAAAATCTTTGGAGGAGACCAAATTGAAGGAAACACAAAACGAGTAGTTGGCACTTATGGATATATGGCACCAGAATATGCAGCCGATGGTCTTTTCTCTGTGAAGTCAGATGTTTTCAGTTTTGGTATATTGTTATTAGAGATCATAAGTGGGAAGAGAAGTAGAGGCTTTTATCATAAAGACCGCTCAAATAACCTGATAGGCCATGCTTGGAATCTGTGGAAAGAAGGGAGTGCAACAGAAATAATAGACACAAACTTAGTGGAATCATGCAATTTATCAAAAGTACTGCGTTGTATTCATGTTGGACTCTTGTGTGTCCAACAATACCCTGAGGATAGGCCTACCATGTCCTCTGTGGTTCTAATGTTAGGAAGTGAAACTGAATTGGCTCAACCTAAAGTGCCTGGTTTTTATACAGAGAAGGATTTCATTGACACCAATTTACAAACGAGTCAAATGGACATTAGCTCCAACAATGAACTAACCATTACCTTATTAGAAGCTCGATGA 1308 0.3953 MIHGKNPKVQPMDTLCFMNIVAYALLISGFKASMAVSSIGEELQSKKKLTIIIVSTLGAVSVVLLLGFCGYIYQAQRKRKMTENPNDNEGDQNRGESVDDLDLPLLDFSTIVVATDNFSSENKIGEGGFGPVYRGKLAHGQEVAVKRLSGSSRQGITEFKNEVKLIAKLQHRNLVKLFSCCIQGNNKMLVYEYMPNSSLDCFIFDDTKSKRLDWPKRFHIICGIARGLVYLHQDSRLRIIHRDLKPSNVLLDDKLNPKISDFGIAKIFGGDQIEGNTKRVVGTYGYMAPEYAADGLFSVKSDVFSFGILLLEIISGKRSRGFYHKDRSNNLIGHAWNLWKEGSATEIIDTNLVESCNLSKVLRCIHVGLLCVQQYPEDRPTMSSVVLMLGSETELAQPKVPGFYTEKDFIDTNLQTSQMDISSNNELTITLLEAR 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0914 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Acco08g0914 435 SUPERFAMILY Protein kinase-like (PK-like) 104 391 IPR011009 -
Acco08g0914 435 CDD STKc_IRAK 124 389 - -
Acco08g0914 435 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 79 193 - -
Acco08g0914 435 Gene3D Phosphorylase Kinase; domain 1 79 193 - -
Acco08g0914 435 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 194 397 - -
Acco08g0914 435 Gene3D Transferase(Phosphotransferase) domain 1 194 401 - -
Acco08g0914 435 Pfam Protein tyrosine and serine/threonine kinase 121 387 IPR001245 GO:0004672|GO:0006468
Acco08g0914 435 SMART serkin_6 118 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0914 435 ProSiteProfiles Protein kinase domain profile. 118 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0914 435 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 43 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0914 Acco-ChrAcco08 8454919 8458453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0914 49 403 Receptor kinase-like Gene Family AT4G23230 53.652 6.28e-134 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g0914 PK_Tyr_Ser-Thr 2.4e-47 CL0016