Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0907 ATGCTTATCCGACTCAACTTCGGGGGAGGAATCGAATCCGAAGCCGAAGCCCAATTCAATGCAAGCCTTGAGCTCATCAATGTCCTCGTTGGTTATGCTCTTAGAGCGGTCCCAAATTCAACAATAAGAAATGGCGATGGCGGTGGTGAAGATGGCTGTGGCTTACAGAGAAAGAGAAGCTCTCTTCTTCCTTGTGGAGTGGTGGAGGAGATCTTGAAGAACAAGAACTCAAGAAGCCAAGTTAGCAACAGTACACAAGAATCAAACTATAGTGTCTCTTTCTCAACTCGTTCTCTGCATTTGGTGACATTTGAAGCTATCTATAACATTACCAAAATGAATGTGCTTTCTTTCATAAGCATCATTACTTACATATTAGTCCCTTCTCTAAGAGTATTTTCCATGGAAGCTGATTCCATTACTGTATCTCAAAGCATCTCAGATGGCATGACCTTAGTTTCCCAGGGAGGGACCTTTGAACTGGGATTCTTCAGTCCTGGAAGCTCCAACAAACGCTATTTAGGAATATGGTACAAGAAGATTCCAAAAAGAACCATTGTTTGGGTTGCCAACCGCCAAACCTCAATCAATGTCACTTCTGGGATCCTGATGTTAAACAGTACAGGAAGTCTTGTCCTCCTCAGCCAAAACGACACTGTCGTTTGGTGTTCAACCCCTCACAAACAAGCAAAAAAACCAGTGGCTCAGCTTCTTGATTCTGGCAATCTTGTGGTGAAAGATGAGGAAGATGCAAACCCAGAAGAAGAAGAAGGCTATTTGTGGCAAAGCTTTGATTACCCATCTGATACAATGTTGCCAGGTATGAAGATAGGACAAATGCCAGTTGGTGGGCAGGATCTATATATTCGAATGAATGCTTCAGAATTAATTGAAGAGGCAGAACCAGGACGTAAGAAGTTAACAAAGACAATTATTGCCATCATTGCCATTGCAACTTCAGGGATGCTTTTACTTGGGTGCATTTGGATCCTTAAAATCTGCAAAAAAAATAGTGATAAATTAGTTAAACATGTAGATCAGGATCAGAACAATGGAAACGATTCTGAAGATTTGGACCTTCCTTTGCTTGACTTGTCAACTATTGTCTTTGCCACTGGTAACTTCTCCATTGACAACAAAATAGGAGAAGGTGGTTTTGGACCTGTGTATTGGGGAAAATTGGTAGATGGGCAAGAAATTGCGGTAAAGAGGCTTTCAAAAAGTTCAAGACAGGGAATGGCCGAATTCAAGAATGAAGTAAAACTGGTCGCAAAACTTCAACACCGGAATCTTGTGAAGCTTCTAGGATGTTGCATCCAAGGGGAAGAAAAAATGCTGGTTTATGAATACATGTCTTATAGCAGCCTGGATTCCTTCATTTTTGATGATGCAAAAGGTGAAGTTCTAGATTGGTCTAAACGCTGCCACATTATTTGCGGTGTTGCTCGAGGCCTTCTATATCTTCATCATGATTCTAGATTGAGAATCATTCACAGGGATCTCAAGGCAAGTAATGTGCTACTTGATGACATGTTGAACCCAAAGATATCAGATTTTGGGATGGCAAGAACTTTTGGAGGAGACCAAATTGAAGGAAACACAAATAGAGTAGTAGGGACTTATGGCTACATGGCACCGGAATATGCTATTGATGGGGTATTTTCAATAAAATCTGATGTTTTCAGCTTTGGTATTTTGCTACTGGAGATAATATCTGGCAAGAGAAATAGAGGGTTTTATCATGCAAACCACAGCCAAAACCTTATTGGTCATGCATGGAGAAAATGGAAGGAAGGCAAGGCTCTGGAACTGATTGACAAGAAAATTGAGGGCTCATGCATTGAATCAGAAGTCCTAAGATGCATCCATGTCAGCCTATTATGTGTTGAAGAACATCCAAAGGATAGGCCTAACATGTCCTCAGTGATTCTAATGCTAGGAAGTGAAATGGAGTTGGCTAACCCTAAGCAACCAGGTTTCTATATGAGCAAGTTCTCAGTGGAAGCCAATTCCTCACAACCTGCAGAATTTGGAACATCCAATGAGATAACCATTACTCAATTAATCGCTCGATGA 2076 0.4109 MLIRLNFGGGIESEAEAQFNASLELINVLVGYALRAVPNSTIRNGDGGGEDGCGLQRKRSSLLPCGVVEEILKNKNSRSQVSNSTQESNYSVSFSTRSLHLVTFEAIYNITKMNVLSFISIITYILVPSLRVFSMEADSITVSQSISDGMTLVSQGGTFELGFFSPGSSNKRYLGIWYKKIPKRTIVWVANRQTSINVTSGILMLNSTGSLVLLSQNDTVVWCSTPHKQAKKPVAQLLDSGNLVVKDEEDANPEEEEGYLWQSFDYPSDTMLPGMKIGQMPVGGQDLYIRMNASELIEEAEPGRKKLTKTIIAIIAIATSGMLLLGCIWILKICKKNSDKLVKHVDQDQNNGNDSEDLDLPLLDLSTIVFATGNFSIDNKIGEGGFGPVYWGKLVDGQEIAVKRLSKSSRQGMAEFKNEVKLVAKLQHRNLVKLLGCCIQGEEKMLVYEYMSYSSLDSFIFDDAKGEVLDWSKRCHIICGVARGLLYLHHDSRLRIIHRDLKASNVLLDDMLNPKISDFGMARTFGGDQIEGNTNRVVGTYGYMAPEYAIDGVFSIKSDVFSFGILLLEIISGKRNRGFYHANHSQNLIGHAWRKWKEGKALELIDKKIEGSCIESEVLRCIHVSLLCVEEHPKDRPNMSSVILMLGSEMELANPKQPGFYMSKFSVEANSSQPAEFGTSNEITITQLIAR 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0907 691 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 450 - -
Acco08g0907 691 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 285 668 - -
Acco08g0907 691 Gene3D Transferase(Phosphotransferase) domain 1 451 658 - -
Acco08g0907 691 ProSiteProfiles Bulb-type lectin domain profile. 137 258 IPR001480 -
Acco08g0907 691 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 133 264 - -
Acco08g0907 691 CDD STKc_IRAK 381 646 - -
Acco08g0907 691 SUPERFAMILY Protein kinase-like (PK-like) 359 657 IPR011009 -
Acco08g0907 691 Pfam D-mannose binding lectin 185 284 IPR001480 -
Acco08g0907 691 SMART serkin_6 375 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0907 691 ProSiteProfiles Protein kinase domain profile. 375 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0907 691 Gene3D - 132 264 IPR036426 -
Acco08g0907 691 SMART blect_4 143 267 IPR001480 -
Acco08g0907 691 Pfam Protein tyrosine and serine/threonine kinase 376 644 IPR001245 GO:0004672|GO:0006468
Acco08g0907 691 Gene3D Phosphorylase Kinase; domain 1 335 450 - -
Acco08g0907 691 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 451 654 - -
Acco08g0907 691 CDD B_lectin 143 267 IPR001480 -
Acco08g0907 691 SUPERFAMILY alpha-D-mannose-specific plant lectins 172 269 IPR036426 -
Acco08g0907 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 496 508 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0907 Acco-ChrAcco08 8329088 8336344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0907 302 660 Receptor kinase-like Gene Family AT4G23230 53.846 9.91e-127 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g0907 PK_Tyr_Ser-Thr 7.4e-50 CL0016