Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0895 ATGCGTGCCTCCAACGCTAGAAATCTTTGTACACTGAGTGGTCTTTTCCGTTCTTCGACCGCGAAACTCAAGACTTCTAAGCCCCAATCCTATTCTCTAGCTTCATCCATTTATGAAGATGATTTTTCGGAACTCGATGGTGATTCTGACTCCACCCGCAACGCTCTCGAGTTTGAGCGACCCTCTGATTCAGAGAAATTGCCTGACCTGGTATCTAAGCAGATTTCTTCTATGTTGTCTGATAAAAAGAAAATTCCAAGAGGTCGAGTTCAAAAGTTTGCAAAATTTGAGTCTTCTACTCTAGATTCATCCATTTTGAAAGAAGATTTTTCAGAACCCAATGGCAAGCCTAGGCTTACAAGCTTCAAGGAACTTGACTACGCACCACCCTCTTGTTCAGAATCTGATGGAGCAGAGAAAAAACTTTCAAGGTGTCAAATTCGCTACTCTTCAAAAATGAAATCCTTTCCTCAAGCATTGTCTGTTTCGGAAGATGAGTTTTCAGAACTTGATAGTGAACACAGTCGTTCTAGCCGTGAAGACCTTGACTTTGTTGAACCCTCTGTTTCAGAGAATTCACCTAATCTCTACACGGAGCAGATTAGTAATATACTGTGTGATGATCAGTTGATCAAGAGATCAGGAGATGATGTAGAAAAATTGGAAATTGCACTAGCTGTACCATGGAGACTTGACCCATTTGGTGGGACTACATCACAGCGACAGAAAGAGAAGACTCGTGACAGAAAGAAAAAGTGGATTTTTAAACACATGCAGGAAAACCGCTTTGAAAGGGTAGTTAAATTCTGTGCAGATAAACTGGGTACAAAGGCTACTGTGGAAGTGTTAGGTAAATTGGGAAGAGAAACAGGCGTGAAAGAATACAATGCATTGATAGAAGTATGCATAAATAATGCCAGGAAAACCAATGATGAAGAAGTGGCAATTGAAGAAATGAGCAAGGCTTTTCGCCTTTTTAGAGTAATGAGAGAACAAGGTTATGAACTACAAGAGAAAACATACAGCCCCCTTCTTGTGTATTTAATTGACATGGGTATGGTTGAAGAATTTCAATTATTCAGTGAGGTGATCAAAGATGAGATTCCCAGTTCAATTTCAAGATTGGGTTACTACGAAATGATGTTATGGCTTAGAGTTGATAACAAAGAAAAGATTCAGGATCTTTGTAACTCTATTGCAGTCAATGATGGTATAGACTCTTCTGGTCTAGGAGAAAGTTATGTATTGGCATTTTGTGAAAGTGATAGGAAGGAGGGGCTTTTACAGCTGTTGGAAATTTTAGACATAACAAAGCTTTCATCTACAGAATCTGTAGCAAGTATTTTCAGATCATTGGGAAGGCTATGCTTGGACTCTCATGCAGAAAAGTTCCTATCCGCTTTCAAAATTTGTGGTATGGATAATGATGAAGCAAATGATGTTACAAACTTCATTGCCAGTTATGTTATTAGCCTACCAAATTTAGCGGTTGAGGATGTTATCTTGAAGTTCGAGGATTTGCACCAAAAACTGGAAGTTTCACCTTCATCCTCATCATACGAGAAACTCATTATATATGCCTGTGACTTAAATGAGGTGCATTTAGCTCTTAAGATTGTTTGTACTATGTGTGAAGCAGACTTTACCTTATCTACTGAGGTGTTAAACTCCATATTACGAAGTGTTGAAGAAACATGTGAATATAATTTGGTCCACTGGATCAATTCCATAATATCTCACTACGGTTTGAAGGCAAATTGTGAAACATTCAGGTATATGATATGCTTGTGCATCAGGATGAAAGATTTTGAAAGTGCAGATAAGATGCTTGATGATTTGGAAGAAATGAATTTGAAGCCTACATCTAGCATGTACAATGCCATTATGGCTGGATATTTTAGAGAGAAAAACGTTGATGATGCTTTTAGGGTCCTTGAGCGCATGAAAGATGCCAATATCAAGCCTGATTCAAGTACTTACAACTATTTGATTGGCAACTCTAAAACTGAGGAGGATATAACCAAGTATTATGAAGAAATGAAGCAGTCTAACTGCCAACTTACTAAGCAGACTTTTGTGGCCCTTATAACTGCATATGCAGCCTGTGGACAGTTGGAGAAGGCAAAACAGGTGGTCTTAGATCCAGCCATTCCTGCAAAGAGCTTAAATGAAATCAAATGTGCTCTTCTCTCAACTCTTGCATCACATGGGCAATTGTCAGATTCTTTTCATATTTACGAGGAAATCAAGGAATCTGGAAACAATCTGGAGCCAAAAGCTGTTATAAGTCTTATTGAGGGACACATCAAATCTGATGAGGAGTTGGATAGATTGTTTCTGCTACTTAAAGAATTGACTGATCCTGACTATTGGATAGATGGTTGCTTTAGAATTATTAAGTTTTGTGTAGAGAACAAGTATTTAAGTTCTGCCGTTGAGTTGATCAAGCAACTCAATGATAAAATTCAGGATAACGAACTAGTAATGGAAGTTCTTTTGGATCAGGTGTTTTCTACAATTGCATCATCAGAGTCCACACATTTGAAGTTTGGCCTTGACCTTTATTGGCTGATCAGGAAAGTGCTTGGCATTGTGCCTTCACGGCAATGTCTGGATTTTCTTCTATCTGCTTGTGCCAATGCCAAAGATTTGCAGAACATTCGTAAAATTTGGGAAGAATACCAGCTTGCTGGATACCCTTTTAATGTTTTAAGTTACGTGAGGATGTATAGAGCTCTTTTGGTTGCAGGAGATTATGAATCTGCCCATCTTATGCTCGAGAAAATTCCAACAGATGATTCCGACGTTCGTCGCGTCATTAAAGAATGTCGAAAAACATTCGATGATCGTTCCAGGGAGAAACTCAAAAAGAAAATGGATAAGAAAGAAGAGGAAGGTTTGTTTGATTGA 2910 0.3852 MRASNARNLCTLSGLFRSSTAKLKTSKPQSYSLASSIYEDDFSELDGDSDSTRNALEFERPSDSEKLPDLVSKQISSMLSDKKKIPRGRVQKFAKFESSTLDSSILKEDFSEPNGKPRLTSFKELDYAPPSCSESDGAEKKLSRCQIRYSSKMKSFPQALSVSEDEFSELDSEHSRSSREDLDFVEPSVSENSPNLYTEQISNILCDDQLIKRSGDDVEKLEIALAVPWRLDPFGGTTSQRQKEKTRDRKKKWIFKHMQENRFERVVKFCADKLGTKATVEVLGKLGRETGVKEYNALIEVCINNARKTNDEEVAIEEMSKAFRLFRVMREQGYELQEKTYSPLLVYLIDMGMVEEFQLFSEVIKDEIPSSISRLGYYEMMLWLRVDNKEKIQDLCNSIAVNDGIDSSGLGESYVLAFCESDRKEGLLQLLEILDITKLSSTESVASIFRSLGRLCLDSHAEKFLSAFKICGMDNDEANDVTNFIASYVISLPNLAVEDVILKFEDLHQKLEVSPSSSSYEKLIIYACDLNEVHLALKIVCTMCEADFTLSTEVLNSILRSVEETCEYNLVHWINSIISHYGLKANCETFRYMICLCIRMKDFESADKMLDDLEEMNLKPTSSMYNAIMAGYFREKNVDDAFRVLERMKDANIKPDSSTYNYLIGNSKTEEDITKYYEEMKQSNCQLTKQTFVALITAYAACGQLEKAKQVVLDPAIPAKSLNEIKCALLSTLASHGQLSDSFHIYEEIKESGNNLEPKAVISLIEGHIKSDEELDRLFLLLKELTDPDYWIDGCFRIIKFCVENKYLSSAVELIKQLNDKIQDNELVMEVLLDQVFSTIASSESTHLKFGLDLYWLIRKVLGIVPSRQCLDFLLSACANAKDLQNIRKIWEEYQLAGYPFNVLSYVRMYRALLVAGDYESAHLMLEKIPTDDSDVRRVIKECRKTFDDRSREKLKKKMDKKEEEGLFD 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0895 969 MobiDBLite consensus disorder prediction 44 67 - -
Acco08g0895 969 Gene3D Tetratricopeptide repeat domain 253 389 IPR011990 GO:0005515
Acco08g0895 969 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 586 620 IPR002885 -
Acco08g0895 969 Pfam PPR repeat family 620 664 IPR002885 -
Acco08g0895 969 MobiDBLite consensus disorder prediction 47 67 - -
Acco08g0895 969 MobiDBLite consensus disorder prediction 171 191 - -
Acco08g0895 969 Gene3D Tetratricopeptide repeat domain 564 669 IPR011990 GO:0005515
Acco08g0895 969 MobiDBLite consensus disorder prediction 171 186 - -
Acco08g0895 969 Coils Coil 815 835 - -
Acco08g0895 969 Gene3D Tetratricopeptide repeat domain 796 967 IPR011990 GO:0005515
Acco08g0895 969 Gene3D Tetratricopeptide repeat domain 670 791 IPR011990 GO:0005515
Acco08g0895 969 MobiDBLite consensus disorder prediction 948 969 - -
Acco08g0895 969 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 621 655 IPR002885 -
Acco08g0895 969 NCBIfam pentatricopeptide repeat 589 621 IPR002885 -
Acco08g0895 969 NCBIfam pentatricopeptide repeat 624 657 IPR002885 -
Acco08g0895 969 PANTHER OS02G0132600 PROTEIN 150 962 - -
Acco08g0895 969 Pfam PPR repeat 691 711 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0895 Acco-ChrAcco08 8203842 8217051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0895 413 781 Glycosyltransferase AT1G05670 22.338 2.32e-12 69.3