Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0887 ATGAATAAGCATCCCAACTTCCTTGTCTCGCTGTGTTTCTCTCTTTTAAGTCATAGTTGCATGATTAACGTACCAAAATAATTCCCCCACCATTTCTTTTCCCTGAGATCCCCTCTCCTTAGAGCCGCGTCTGGAACCGCGGCCACCACCGCCCTTCATCGATCGGCCGGGGACTTCTCTTTGTCGTCGTTTCTGTTCAATTCTTGCTTCATAAAAAAGAGGAGGGACATCACAAATATGAAAGTTCCTTGGAAGGCCTTATCGTCCTTCCAATTCACTTTGCTTCTATTGTTGTTTATCTTAGCTTTTTGTTGGAAACTCGACGTATGTTATGGACAAGAACAAAACGATTACGACAGCGGCGAGACAACAAAGAGACCGAAGGAGCTGGACAACTGTAATGGAGTCTTCTTGTCGTACAACTTTCAGGGACGGACAAAAGAGTTTCCTCATGTGAAGAACGTGTCAAAGCAGGCTTGGGCGTTTGAGGCAACGGCGTCGTTGACCAACGTCGGCGATGAGGAGGTGGTTGGGTGGAACATGTTCGTTGGGTTCCAGCACAATGAGATTCTCGTGTCGGCGGATGGCGCGGTGCTCCTTGACGCCGGCGACTTCCCGGCCAACGTCAGTAATGGGACCATGATGGCGGGAAGCGACATGACGGACTTGAAGACGGCCATTAATACGGCCAGCGATTTTGATCAAATGTCTGTTAATATTAAGATCAAAGGAACCATGTTTGGCTCCAAAACAGGAACCACTCCCATGCCCAAGACCATCAAACTCGTTAACGATGGCTTCAAGTGCCCCGCCGCAACTCGACGACAGTCGAACATGTTTGTATGCTGCAAGAAGGATCCAAAGGCGACGGTGCTGAATAAGATGAGGACGAAATTCCCTCCACGACGGTATGGCGACATAACCATCGGCTACGACGTGATTCAGGCGAGCAAGAACAATTACTACGCGCAGATCACCATGGACGCGAAGCACCCACTCGCTCGCCTAGACCACTGGAACGTCTCATGGCAATGGCAGAAAGGTGAGTTCATAAGTTCCATGAAAGGCGCTTACTCCCATATGAGAGACGTCTCACAGTGCCTTTACGGCACCGCCGGAAAATTCTACTCCGACTTTAACTTTAACCAGCAAGGTGTTAACTGTGACAAATCCCCCATCCTCTCCGACCTCCCTCCCACCGTCAAGGACGACGAAAAGCTCGGCAAACTCCCCTATTGCTGCCGCAACGGCACCCTCTTGCCGCCGTCACTGGACCCAAGCCGAGCTCGGTCCGTCTTCCAGATCAACGTCATGAAGATGCCGCCGGATAACAGCATGACCACCGCCATTACTCCTCCCTTGAAGTGGCAGCTCGACGGCGTCATCAACCCAGTGTACAGGTGTGGGCAGCCCATCCGGGTCTCCCCACAAGAGTTCCCCGACTCGAGTGGGCTTCAGGCCGTTACCCTCGCCGTTGCCAGCTGGCAGGTGGCCTGCAATATGACAAAGCCAAAGCCCAAGCAGAACCGTTGCTGTGTATCGTTCTCCGCCTACTACAACGACTCTGTAATCCCATGCAACACATGTGCATGTGGGTGCGACAATACCAAAAAGTGTGATCCCAATGCCAGATCCTTGCTTCTTTCACCGGAGGCTCTTCTCGTGCCGTTCGTCAACAGAACAGCGAAGGCCATAGCCTGGGCTGCTTTAAAGCACCATAGATTACCCAAAAAGCTTCCTTGCGGAGACAACTGTCCGGTGAGCTTAAACTGGCACGTCAACTCCGACTCCGTCGCCGGATGGACGGCAAGGATGACAATCTTCAACTGGGGCGACGACACTTTCGAGGACTGGTTCTCAGCGATCTCTTTTAAAAGGTCGTACCCTAATTTCGACAAGGTCTTCTCCTTCAACGGCACGAAGGTGGATAATATAAGCACATTGATCTTCAATGGGTTAAAGGATATGAACTACTTGATGGGAGAGACGAACGGGACACATCAGTATGACCCTAAGGTTCCAGGAAAACAGCAATCAGTGATAACGTTTAACAAGAAGAACATTAAGAATTTTGATATCAGTAAAGATGGGTTTCCGACCAAGGTCTACTTCAACGGCGAAGAGTGTGCTCTTCCTGCGTACGTGCCACGTAAGAGCTCAGGGCATCACCGAGCTTCTTCTTCCATAGTTGCAGCCATTTTAGTAGCGTTGGTGACATTCTTGATGATGACGACGATCGGGGAAAATCGCTATTACTTGTGA 2262 0.5053 MNKHPNFLVSLCFSLLSHSCMINVPKXFPHHFFSLRSPLLRAASGTAATTALHRSAGDFSLSSFLFNSCFIKKRRDITNMKVPWKALSSFQFTLLLLLFILAFCWKLDVCYGQEQNDYDSGETTKRPKELDNCNGVFLSYNFQGRTKEFPHVKNVSKQAWAFEATASLTNVGDEEVVGWNMFVGFQHNEILVSADGAVLLDAGDFPANVSNGTMMAGSDMTDLKTAINTASDFDQMSVNIKIKGTMFGSKTGTTPMPKTIKLVNDGFKCPAATRRQSNMFVCCKKDPKATVLNKMRTKFPPRRYGDITIGYDVIQASKNNYYAQITMDAKHPLARLDHWNVSWQWQKGEFISSMKGAYSHMRDVSQCLYGTAGKFYSDFNFNQQGVNCDKSPILSDLPPTVKDDEKLGKLPYCCRNGTLLPPSLDPSRARSVFQINVMKMPPDNSMTTAITPPLKWQLDGVINPVYRCGQPIRVSPQEFPDSSGLQAVTLAVASWQVACNMTKPKPKQNRCCVSFSAYYNDSVIPCNTCACGCDNTKKCDPNARSLLLSPEALLVPFVNRTAKAIAWAALKHHRLPKKLPCGDNCPVSLNWHVNSDSVAGWTARMTIFNWGDDTFEDWFSAISFKRSYPNFDKVFSFNGTKVDNISTLIFNGLKDMNYLMGETNGTHQYDPKVPGKQQSVITFNKKNIKNFDISKDGFPTKVYFNGEECALPAYVPRKSSGHHRASSSIVAAILVALVTFLMMTTIGENRYYL 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0887 753 Pfam COBRA-like protein 321 502 IPR006918 GO:0010215|GO:0016020
Acco08g0887 753 PANTHER COBRA-LIKE PROTEIN 7 91 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0887 Acco-ChrAcco08 8118270 8123116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0887 78 743 COBRA Gene Family AT3G20580 54.086 0.0 746