Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0881 ATGGAGGGTAGTAGTCATCAGAACGGAAATGGGCTTGAAGGATACGACGAAGACTACAATAGATTACCAGGATTGATTGAGAGTCAAGATGAGTCACTGATGGATTTTTTGAAACGAGAAATTGCTGAGATGGATCGAAGCAGGATAAGATCAGGAAGGCGCTTGGATTATTTAGATTTAAAAAAGTCTGATGCTTCAAATGGTCAGGAAGCAAGTGGCTCTGGTTCAACATCAAATGCAAATACAGATGAAAATGTTGGAATCAACAGTCCAGGGCGAGCAAGTGACCTTCTTCTAGTAATGTCTTTCAGTGCAGCGCCAATGAGATCAAAAATCATCGAGCTTTCGGGTTCAGCCATGGAAGAATTAAAGAAGCTGGTTGTTTCAGGAGATATATTTTGGCAGCGCCTAGAGGGAAAAGAGAAATATGAAACCCTAAATGGTTTTCAATACATGAGACACTTTGGGGATGTGGATAAGACTCTAAAAGAGATCATTAATATGGTTGAGATTGGTGAGCCTGAATATTTACCCTTCTTTGACTCTCGCTCCATTGAGAGTGATTTGAAACTGAAGGCTACTCCTGCTGAAGCTTTTGAGGTTGAAGCTTCTCGAGATTTTTCTTATCTTAGAATGAACCCAATTGATATTGCTGAATGGTTTATGGATGTGGAGAAATGGTCGGATGTGTTTTTCAACATAGTTTCGAGAGCAGAGATTCTGGGAATTTTGATCGATGGAGTTGAAGGGAGCTTAGATGGAAGATTGCAAGTTATGAGTGGCGAATTCCAAATGGCGACAGCGCTGGTGCGTACTAGAGAGTGTCATTTTGCCAGATACTGTAAGAAGCTCTCTGATACAACTTGGGCCATCGTAGACGTATCGTTGGAGAAGTATTTTCCACATCCTTCCATCAATTTTCGAAGAAGGCCTTCTGGTTGCTTGATTCAATTCATGCCTCATCATGGATACTCCAAGATTACGTGGGTGGAGCATGTGGAAGCAGACAATAGAGAGTTAAACTTGACATTCAGGAACCTAATCAAATCAGGTTTTGCTTTTGGAGCAACTCGTTGGCTTGCAGCTTTGGTTCGCCAATATGAGTACTCCCAAACTCTCAAAGAAAAATACGCTCCTCCTGAAGATACACTCAAGACCATACCTGAAACTGGAAGAATGGGTATGTTGAAGTTAGGAGAGAGGATGATAAGGACCTTCTGTACTGAGACAAGTGGAGCCCTAAGAAACCAGTGGAACCGGTTGCCTTCATCTTCTAAAGATAGTGAAAACGTTAGGGTCGCCATTAGAGAGCAAGTTGCTGAACCTGGACAACCTTCTTCTACTACTATCGCCTTCTCTACTTCTCAATGGTTTCCGATCCCTCCTCGCCGGTTATTCGACTTCCTTCGTGATGGCCGTTACCGATCCATGTGGGATATGCTTGCGAGGGGGCTTGGTGTTCAAGAACTGTCCTACATTGTTAAGGGCAAAGATCCTGCAAATCGTGTCTCTCTGATGCAAGTTACTGATGACGAGGGCACTAATGTGATACACTACATTCAAGAGAGCTACACTGACAATAGTGGTAGCTATGTGGTGTATGCACCGGTGGACGAACCAGCGGTGACTGCCCTATTGGAGGGAGTAGACCCGGACATGGTTGGTATTTTGCCCTCAGGTTTTGCCATTGTCCCTGATGACATACCTAAGGACGATGGGCCCCGCAGTATTCTTACGGCTTCCTTTCACATTGTTGACAATTACCCTACCAAGTCCCATGATGTGCCTCCTAGATCCTTGCTTGTCGTTAAGAGGATCCTCAGAGATACTTTGAAAGCTGTTAAAAGTTTCGTGATCAATGCCGAATAA 1869 0.4371 MEGSSHQNGNGLEGYDEDYNRLPGLIESQDESLMDFLKREIAEMDRSRIRSGRRLDYLDLKKSDASNGQEASGSGSTSNANTDENVGINSPGRASDLLLVMSFSAAPMRSKIIELSGSAMEELKKLVVSGDIFWQRLEGKEKYETLNGFQYMRHFGDVDKTLKEIINMVEIGEPEYLPFFDSRSIESDLKLKATPAEAFEVEASRDFSYLRMNPIDIAEWFMDVEKWSDVFFNIVSRAEILGILIDGVEGSLDGRLQVMSGEFQMATALVRTRECHFARYCKKLSDTTWAIVDVSLEKYFPHPSINFRRRPSGCLIQFMPHHGYSKITWVEHVEADNRELNLTFRNLIKSGFAFGATRWLAALVRQYEYSQTLKEKYAPPEDTLKTIPETGRMGMLKLGERMIRTFCTETSGALRNQWNRLPSSSKDSENVRVAIREQVAEPGQPSSTTIAFSTSQWFPIPPRRLFDFLRDGRYRSMWDMLARGLGVQELSYIVKGKDPANRVSLMQVTDDEGTNVIHYIQESYTDNSGSYVVYAPVDEPAVTALLEGVDPDMVGILPSGFAIVPDDIPKDDGPRSILTASFHIVDNYPTKSHDVPPRSLLVVKRILRDTLKAVKSFVINAE 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0881 622 SUPERFAMILY Bet v1-like 391 584 - -
Acco08g0881 622 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 83 616 IPR042160 -
Acco08g0881 622 ProSiteProfiles START domain profile. 105 372 IPR002913 GO:0008289
Acco08g0881 622 Pfam START domain 195 366 IPR002913 GO:0008289
Acco08g0881 622 SUPERFAMILY Bet v1-like 159 367 - -
Acco08g0881 622 MobiDBLite consensus disorder prediction 65 89 - -
Acco08g0881 622 CDD START_ArGLABRA2_like 109 368 - -
Acco08g0881 622 SMART START_1 158 369 IPR002913 GO:0008289
Acco08g0881 622 MobiDBLite consensus disorder prediction 61 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0881 Acco-ChrAcco08 8010966 8017877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0881 94 566 Homeobox Transcription Factor Family AT4G21750 42.737 2.59e-117 365
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3574 01 52277867 52281585 Acco08g0881 08 8010966 8017877 CCT
Acco08g0881 08 8010966 8017877 Acco08g0881 08 8010966 8017877 ECH