Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0876 ATGAGCAGCAATATCAATAATTCAGCTCTCTCACCTGAGTCTCACAGAACTGGTGTTAGAGCCACTGGTTACCAAATTCCCACCCATAGGAACTCCTTCGAGGTGTCTGCGTTGTCCCGGTCTCCTTCTACGCATTCCATTCCTCCTCAGATGACACCAAGTCCACTGAATCCTCTGTGGTATATGGGAGATAGAAGGCAAGCAGGGCTCTACAGCATACCTGAAAGTGACTCTTACGAGGTGCCTATGTATCACCAAGTTTATTCAAGACATGCCACTTCTGTTCAGATGACACCAAGTTCGCAGAATCCTCCGTCGTATCTGGCAGATAGAAGGCATGAAGGACTCTACATTACACCTCATGACTCTTATGAGGTGCCAGTGTTCTACCGATCTTCTTCCAGACAAGCCAACCCTTATTTTCAGGATGACAGAACATCAAATGCAGTGAATCGTCCACGATTTCTGGAAGACAGTTTTCCAGCACGACTGCACATTCTCAATGGAGATGCAGGAATGGGATTCAGCAACAGGATCAGAGAAACTCACCGGCCATCAGTTCCGGCTCGAAGATCCGCACGACAATCAGACACACAAGCTCCAACGACGATGGAAAATCCCAGATCTAGGGCATTGAGCAAGCTGAAGAAAGAAATCTACGAACCAAATATTCCAAGTTCAAAAATGCTTGCGAAGAAATTAAGCCTCTATTACAGAGATTCAAAAGGTGCGAGTGCGTTGATGGAGATGGAGAACAAGGAAAAGAACGAAGAGGGAAAGAGTTGCGCGGTGTGCTTAGAGGATTTCGTGCCGAAACAGGAGGTAATGGTGACGCCTTGCAAGCACATGTTTCATGAGCATTGTATAATGCCATGGCTGAGAAGCCAAGGTCAGTGTCCGATCTGTAGATTTGTGATCTGCGAGAAAGAGAGGGAGAATCAATTGCCGGTAAACGACGAACAAATTGGCACCAGTATCGTAATAGCAGGCGAGCTTATGTCTCTTATGAGGGCCATGGAAGAAGTCTTCCGATTCGGTCCTGAAACTCACTGA 1053 0.4672 MSSNINNSALSPESHRTGVRATGYQIPTHRNSFEVSALSRSPSTHSIPPQMTPSPLNPLWYMGDRRQAGLYSIPESDSYEVPMYHQVYSRHATSVQMTPSSQNPPSYLADRRHEGLYITPHDSYEVPVFYRSSSRQANPYFQDDRTSNAVNRPRFLEDSFPARLHILNGDAGMGFSNRIRETHRPSVPARRSARQSDTQAPTTMENPRSRALSKLKKEIYEPNIPSSKMLAKKLSLYYRDSKGASALMEMENKEKNEEGKSCAVCLEDFVPKQEVMVTPCKHMFHEHCIMPWLRSQGQCPICRFVICEKERENQLPVNDEQIGTSIVIAGELMSLMRAMEEVFRFGPETH 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0876 350 FunFam RING/U-box superfamily protein 246 320 - -
Acco08g0876 350 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 136 304 - -
Acco08g0876 350 MobiDBLite consensus disorder prediction 191 209 - -
Acco08g0876 350 MobiDBLite consensus disorder prediction 182 210 - -
Acco08g0876 350 Pfam Ring finger domain 261 303 IPR001841 -
Acco08g0876 350 ProSiteProfiles Zinc finger RING-type profile. 262 303 IPR001841 -
Acco08g0876 350 SMART ring_2 262 302 IPR001841 -
Acco08g0876 350 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 246 319 IPR013083 -
Acco08g0876 350 SUPERFAMILY RING/U-box 253 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0876 Acco-ChrAcco08 7942128 7944796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0876 176 346 C3H Transcription Factor Family AT3G58720 40.984 3.71e-38 135