LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco08g0864	ATGATGATTGTTTCGAAGGCTAGCTTCTGCGTTATTTTGGTTCTTCTCACGACATCAGTTAGTTCAAAATATTCTGAAGAAACACAGGAAGATTTCCTTTGCCGGCAACTGCTTGATCCCACCTCTGGATTGTTGGATGAGAATACGGTACAGCATTTACGGACCAGTTGCTCTGTGGATTTGATTAAATTGAAGGAAGAAGTTAGAAATCTTGACTTATGTTCTCCACATGAATCATCACCCAGTTGCACCAATGATATTGGTTCAGAGGCTCAATTATTAGAAGGAGAGAATATCCAAAATTGGATTAACGCTTGCCATCCTCAATTGAAGCAAATCTTTCTTCACTGTTTGAGAAAGAATAATCTTCCACTCCAAGGTGTATCCGGTGATGCAAATGATGATTCCAGATCCAGTGACCCCGCAGTTAAATCATATATCCAAGAACCCGCAAGGATGATGTATGCCGAAGATGAATCTAAATCCAAAGGAAATGAAGATAAGAAAAAAGATAAAAAGATTAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGTGATAAAATCATGGTTATAGTTTTTGTTGCTGCAGCTGGCGTGTCAGTGACTCTAGCAGTACTGCTCTGTGTTTTGTGTTGCTGTTGTGCTGGCGAAAGACACGTTGGAAAATATGATGAGAGGCCCCTTCTCAGTCTGAGCAGGAGTGACTACTCTTCCTCAGGTTCTACTCTCAAATATTCTTCTGGAAAATCAGTAAGAGATCAGAAATTTGGGTTTCAGTCACATGATGATAATTCAATTGACCAAAAAAGGACCTCATCTCTTAATGGCGATTTTCCTGTTGGATCTGATGTGCAGGATTCACCTGCATTTGCTGGTACTGATGCTACTGCCAGACCATCATTTGACCTGAAGCCTCCTCCTGGTAGGGTGGGAGCCAGCACTTTGAAACCTCCACCAGGAAGGCCAGATCTCCTTCCCCCTGAGCCACCTTCTAGTAATTCCACTACTTCTACTCCTCCTCCTCCTCCTGCACCCCCACAGCCACCCAAAACTGCTACCGGACCACCTCCACCACCACCACCAGCACTACCTGGTGCCAAAAAAAGTGCTGGCGCACCACCACCTTCTCAAAATGGTAAAGGTCCTCCTCGACCACCTCCGCCACTCGGTGTAAAGGGTCCACGCCCTTTGGTTGTGCAGAAAAAATCGAGAGCTGCAGGATCTGGAGGAGCTGCTGATTCAGAAGGTGGTGCTGATTCTCAAAAAGCCAAGTTAAAACCTTTTTTCTGGGATAAGGTTCAAGCCAACTCAGATGAAACAATGGTTTGGAATCAGCTTGAAGGAGGATCATTCCAGTTTGACGAAAAAACGATGGAGTCACTTTTTGGCTATACCAATACAGATAGAAGCAAAGGTCAAGTCAAGAAAAAATCTGCCCCCATGGAACACGCACCTCAGTTTATCCAGATCATTGACCCAAAGAAATCACAGAATTTGTCTATCCTATTGCGTGCTTTGAATGTGACTATGGAAGAAGTTTATGATGCACTTACCGAAGGAAATGAGATTCCCTCAGAATTTATCCAATCCTTGCTCAAGATGGCACCCTCATCTGAGGAAGAACTTAAGCTTAGACTTTTCGATGGCAAACTGTCTGAGCTTGGGCCTGCCGACCGGTTCCTGAAAGCCCTTGTTGATATTCCATTTGCTTTTAAACGACTGGAATCACTTCTTTTTATGGGCACTCTTCAAGAGGAGCTTACCTTCACCAAGGATGCTTTTGCAGTTTTAGAGGTTGCTAGTACAGAACTAAAAGGTAGCCGGCTGTTCCTGAAGCTTCTAGAAGCTGTTCTCAAAACTGGTAACCGTATGAATGATGGAACATTCCGTGGTGGTGCGCAAGCATTTAAACTTGACACACTCCTTAAACTGTCTGATGTTAAATCAGCAGATGGCAAAACTACACTCTTACACTTTGTTGTCAAAGAGATAAGCCGAACTGAAGGCATAAGAGCAGCTCATACGACGATAGAGAGCAAGAGTTTCTCTAGCATTAAAACAGATGACCTGCTTGAGGAAGTTCCCATGGAATCTGAAGAACGGTATCGCAAACTTGGTCTCCAGGTGGTATCTCGATTGAGCAGTGAGCTTGAGAATGTGAAGAAAGCAGCAGCTCTAGATGCTGATGCTTTAACAGGAACAACTGCAAAAGCTGGGCATTCTCTCTTGAAATGCAAAGAATTCTTAAGCAAAGACCTCAAGGAGTTAGAAGGAGAAAACAAAGGAGGGTTTCATCTGACAGTGGAGAGTTTTGTGGAGAATGCTGAAAGAGCTATCAATAACCTGGTGGAAGAAGAGAAGAGGATCACGGCTATGGTGAAGAGTACAGCTGACTACTTCCATGGAAATAGCGGGAGGGAAGAAGGGTTAAGACTGTTTGCGATTGTACGAGACTTCTTGGTCATACTGGATAAGGTATGCAAGGAGGTTGGAGATGAACAGAAGAAGGCAGCAGCAGCAGCAAAAGCTCCTAAAAAAGAGCTTGCCAAGGCTCCTTCTTCTGAGAGTGCTCGCCCACCACCACCACACAAGAAGCTTGTTTCAGGGTTATCAGATAGGAGGATGGATGACTTTAGTTCAGATGATGAGAGTCCATAG	2658	0.4394	MMIVSKASFCVILVLLTTSVSSKYSEETQEDFLCRQLLDPTSGLLDENTVQHLRTSCSVDLIKLKEEVRNLDLCSPHESSPSCTNDIGSEAQLLEGENIQNWINACHPQLKQIFLHCLRKNNLPLQGVSGDANDDSRSSDPAVKSYIQEPARMMYAEDESKSKGNEDKKKDKKIKKKKKKKKKKSDKIMVIVFVAAAGVSVTLAVLLCVLCCCCAGERHVGKYDERPLLSLSRSDYSSSGSTLKYSSGKSVRDQKFGFQSHDDNSIDQKRTSSLNGDFPVGSDVQDSPAFAGTDATARPSFDLKPPPGRVGASTLKPPPGRPDLLPPEPPSSNSTTSTPPPPPAPPQPPKTATGPPPPPPPALPGAKKSAGAPPPSQNGKGPPRPPPPLGVKGPRPLVVQKKSRAAGSGGAADSEGGADSQKAKLKPFFWDKVQANSDETMVWNQLEGGSFQFDEKTMESLFGYTNTDRSKGQVKKKSAPMEHAPQFIQIIDPKKSQNLSILLRALNVTMEEVYDALTEGNEIPSEFIQSLLKMAPSSEEELKLRLFDGKLSELGPADRFLKALVDIPFAFKRLESLLFMGTLQEELTFTKDAFAVLEVASTELKGSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKSADGKTTLLHFVVKEISRTEGIRAAHTTIESKSFSSIKTDDLLEEVPMESEERYRKLGLQVVSRLSSELENVKKAAALDADALTGTTAKAGHSLLKCKEFLSKDLKELEGENKGGFHLTVESFVENAERAINNLVEEEKRITAMVKSTADYFHGNSGREEGLRLFAIVRDFLVILDKVCKEVGDEQKKAAAAAKAPKKELAKAPSSESARPPPPHKKLVSGLSDRRMDDFSSDDESP	885

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco08g0864	885	MobiDBLite	consensus disorder prediction	376	393	-	-
	Acco08g0864	885	MobiDBLite	consensus disorder prediction	154	180	-	-
	Acco08g0864	885	SMART	it6_source	415	838	IPR015425	-
	Acco08g0864	885	Gene3D	Formin, FH2 domain	421	858	IPR042201	-
	Acco08g0864	885	MobiDBLite	consensus disorder prediction	234	421	-	-
	Acco08g0864	885	MobiDBLite	consensus disorder prediction	834	885	-	-
	Acco08g0864	885	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	415	849	IPR015425	-
	Acco08g0864	885	MobiDBLite	consensus disorder prediction	834	852	-	-
	Acco08g0864	885	MobiDBLite	consensus disorder prediction	154	169	-	-
	Acco08g0864	885	MobiDBLite	consensus disorder prediction	867	885	-	-
	Acco08g0864	885	Pfam	Formin Homology 2 Domain	420	822	IPR015425	-
	Acco08g0864	885	MobiDBLite	consensus disorder prediction	234	254	-	-
	Acco08g0864	885	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	428	840	-	-
	Acco08g0864	885	Coils	Coil	768	792	-	-
	Acco08g0864	885	MobiDBLite	consensus disorder prediction	319	368	-	-
	Acco08g0864	885	PANTHER	FORMIN-RELATED	142	869	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco08g0864	Acco-ChrAcco08	7830822	7836434	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco08g0864	389	876	FH2 protein (formin) Gene Family	AT5G54650	61.382	0.0	560

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Acco01g3373	01	50805967	50811658	Acco08g0864	08	7830822	7836434	CCT
	Acco08g0864	08	7830822	7836434	Acco08g0864	08	7830822	7836434	ECH