LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco08g0862	ATGACAAGAGTGTGGTTATCTCTGAAAACCTCTCTTCACTGCAAATCAGAACCTTCAGATGTTCATGACCCAAAATCGAAGACCCATTTAACCGCAATATCCACGGGAAGACCCGGAAGAAGATCCGGCTGTTCCTGTTCCAGAAGCATCTCCAATCTCAAAGACGTAATCAATGGAGGAAGCATCAAGGTAAGGCACTCCGACAAGCCTCCGAGGTACAGCTCGAGATCCATCGTAAGCAGCGAGTTACTCAACTCGACAACCCATGAAGTCATTCTCACCGGCGGAGGCTCAACATTTGTGGGTACTCTAAGGCCTGGAACTCCATCTCCGTTCAGGAACAGTGAAAAGTCCTCACCTTTTCTTATATCAGATTCATCAGAAGGAGGATTTGTAGCAAGCAAAAGGTTCTCAGTTGAAGTAGATTCAAATGGTTATTATTCTTGTGCGAGTTGTTCCAAATGTGGAGAGAAACTCTGTAAATGGGAAGATGCTGAGTCTCATCATCTTTCAAAACATGCAGTGACAGAACTTGTGGAAGGAGACTCATCAAGGAAAATAGTGGAGATAATATGCAGAACAAGGTGGACGAAACCAGAGAAGAAAGATTACTACTGTTCAAGAATAATGGACAAGGTTATGAAAGTGCACAACACTCAGAAAACCCTAGCTCGATTCGAGGAGTACAGAGAGAGCGTGAAGATGAGAGCCAGCAAGCTCCAGAATAAGAAGCACCCTCGCTGCCTCGCAGACGGCAACGAGCTTCTTTCCTTCTACGCTACCACTCTCTCCTGCTCTCTCGGCGGCTCCAACTCCAACACCTCCCTCTGCGTTTCTGAGGATTGCTGTGTCTGCAGAATCATCAGAAACGGCTTCTCTGTCAAGAATGGGAACGGGATCGGGATATTCACGGCTGCGACGAGTGGAAGAGCCTTGGAGAGTTTGGAGGATGGTAGTGGTGACGACGATGATGAAGGAAGTGAGAAGAAGAAGAAGAAGGTGTTGATAGTGTGTAGGGTAATTGCAGGTAGGGTTCACAGGCCATTAATGGAGAATGTAGTGAAGGACATGGTTGGGCTGCAGCAAAATGGCTTTGATTCCTTGGCGGGAAAACTTGGGATTCATTCTAACATTGAGGAGCTTTATTTGCTTAATCCCTCTTCTCTTCTTCCTTGTTTTGTTGTCATTTGTAAACCCTGA	1200	0.4608	MTRVWLSLKTSLHCKSEPSDVHDPKSKTHLTAISTGRPGRRSGCSCSRSISNLKDVINGGSIKVRHSDKPPRYSSRSIVSSELLNSTTHEVILTGGGSTFVGTLRPGTPSPFRNSEKSSPFLISDSSEGGFVASKRFSVEVDSNGYYSCASCSKCGEKLCKWEDAESHHLSKHAVTELVEGDSSRKIVEIICRTRWTKPEKKDYYCSRIMDKVMKVHNTQKTLARFEEYRESVKMRASKLQNKKHPRCLADGNELLSFYATTLSCSLGGSNSNTSLCVSEDCCVCRIIRNGFSVKNGNGIGIFTAATSGRALESLEDGSGDDDDEGSEKKKKKVLIVCRVIAGRVHRPLMENVVKDMVGLQQNGFDSLAGKLGIHSNIEELYLLNPSSLLPCFVVICKP	399

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco08g0862	399	PANTHER	C2H2-LIKE ZINC FINGER PROTEIN	4	397	-	-
	Acco08g0862	399	FunFam	C2H2-like zinc finger protein	174	398	-	-
	Acco08g0862	399	Gene3D	-	175	398	-	-
	Acco08g0862	399	SUPERFAMILY	ADP-ribosylation	175	398	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco08g0862	Acco-ChrAcco08	7809525	7813086	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco08g0862	4	399	C2H2 Transcription Factor Family	AT5G54630	54.860	9.89e-148	426