Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0842 ATGTCCGTTATGCCGTTGGGGCCGCACCAGCAACAACCGCCGGCGGCGGCGGCAGCTCCCCAGCCTCCACCTCCGTTGCCGGCACAAGCTGAGAATGACAAGGAAATGTCAGCTACAGTCCTTGAGGGGAATGATGCAGTCACTGGCCACATAATCTCCACCACAATTGGAGGCAAAAATGGGGAACCTAAGCAGACCATCACTTACATGGCAGAACGCGTTGTTGGCACTGGTTCATTTGGAATTGTTTTCCAGGCAAAGTGCTTAGAGACTGGAGAAGCAGTGGCTATAAAGAAGGTCTTGCAGGACAGGCGGTACAAGAATCGTGAGCTTCAGTTAATGCGTTTGATGGATCACCCGAATGTCATTTCCCTGAAGCACTGTTTCTTCTCTACAACAAGCAGAGATGAACTTTTTCTCAATTTGGTTATGGAATATGTCCCTGAAACATTGTATCGAGTTCTAAAACACTATACTAGTATGAATCAAAGGATGCCTCTCATCTATGTGAAACTTTATACATATCAAATCTTCAGGGGACTAGCATACATCCATACAGTACCAGGAGTTTGCCATAGAGATGTGAAACCTCAAAATCTTTTGGTCGATCCTCTCACTCATCAAGTTAAGCTTTGTGATTTTGGGAGTGCAAAAGTTCTGGTCAATGGTGAATTAAACATTTCATACATATGTTCACGTTACTATCGGGCCCCAGAACTAATATTTGGTGCAACAGAATACACAACTTCTATTGATATTTGGTCGGGTGGTTGTGTCCTTGCTGAGCTGCTTTTAGGTCAGCCATTATTTCCAGGAGAAAATCAGGTGGACCAACTTGTGGAAATCATCAAGGTCCTTGGTACTCCAACTCGAGAAGAAATTCGTTGCATGAACCCTAATTATACAGATTTTAGATTCCCTCAGGTTAAAGCTCACCCTTGGCACAAGGTTTTCCACAAGCGAATGCCTCCTGAAGCAATTGACCTTATATCAAGGCTTCTCCAATATTCGCCAAGTCTTCGCTACACTGCGCTGCAAGCATGTGCACATCCTTTCTTTGATGAGCTCCGGGAGCCTAATGCCCGACTTCCCAATGGCCGTCCACTGCCCCCACTTTTCAATTTCAAACAGGAACTGTCTGGAGCATCGCCTGAATTGATAAATAGGCTCATCCCAGAGCATATTAGGCGGCAGGTTGGCCTCAACTTCCCTCATCCGGTTACATAG 1227 0.4572 MSVMPLGPHQQQPPAAAAAPQPPPPLPAQAENDKEMSATVLEGNDAVTGHIISTTIGGKNGEPKQTITYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYTSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVNGELNISYICSRYYRAPELIFGATEYTTSIDIWSGGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQVKAHPWHKVFHKRMPPEAIDLISRLLQYSPSLRYTALQACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELINRLIPEHIRRQVGLNFPHPVT 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0842 408 SUPERFAMILY Protein kinase-like (PK-like) 69 379 IPR011009 -
Acco08g0842 408 CDD STKc_GSK3 64 356 IPR039192 -
Acco08g0842 408 Gene3D Transferase(Phosphotransferase) domain 1 149 396 - -
Acco08g0842 408 Gene3D Phosphorylase Kinase; domain 1 54 148 - -
Acco08g0842 408 MobiDBLite consensus disorder prediction 15 29 - -
Acco08g0842 408 Pfam Protein kinase domain 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0842 408 ProSitePatterns Protein kinases ATP-binding region signature. 75 99 IPR017441 GO:0005524
Acco08g0842 408 ProSiteProfiles Protein kinase domain profile. 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0842 408 FunFam Glycogen synthase kinase-3 beta 53 148 - -
Acco08g0842 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Acco08g0842 408 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 33 398 - -
Acco08g0842 408 MobiDBLite consensus disorder prediction 1 32 - -
Acco08g0842 408 FunFam Shaggy-related protein kinase kappa 149 396 - -
Acco08g0842 408 SMART serkin_6 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0842 Acco-ChrAcco08 7564827 7569932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0842 73 391 MAP Kinase Gene Family AT3G59790 35.629 7.25e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Acco08g0842 Pkinase 1e-63 CL0016