Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0833 ATGGCTGAGAGTGAGAGATCAATTTACATATCCCACGAAAACAAGAACGAAGATAGTAACAACAGCAGCAGCAACATCGCCGCCAAACCATCTTCTTCATCGTTTTCTCCTTCTTCTCGGCTTCTTCAAAAGGGTTCGTTGTTTGACCTGAACGAAGAAGCTATGGACGATCTTGGTGGTGACGTTAATAATGGAGGATCGTATTCATCGTCGTCGTCAGGAGAAGGTAATGTGACTAGCAACAACTCAAGTTCAGAAGTGAAAGAGAGAGCAAGTAGTAGTTTGAGGCAATATGTAAGATCCAAAATGCCAAGGCTTCGTTGGACTCCTGATCTCCATCTTGCTTTTGTTCGTGCTGTTGAAAGGCTTGGGGGACCGGAAAAAGCAACGCCTAAGTTAGTTTTACAGTTGATGAATGTGAGAGGACTTAGCATTGCGCATGTTAAGAGCCACCTGCAGATGTATCGAAGCAAGAAACTTGATGAGTCTGGCCAAGTTTTATCCCAAAATAGGGCAACATTAATAATGCAAGGACAAAGAGATAATATTTTGGATATGTACCATAGATTTAGTGCTCATCATCAAGGAGGAGGACACTTTGGGATTGATGACTATCTCCCAACATCACCTCTCGTTATGAAGCCAATGTTCGACTTTAAATCTCATGGTTATTCAAGATATCCACCAGGGTCAAGATCAAGTTCATCAGTAGTAGGGTGGAGCAACAACGACTTAGGGTTGTGTGAGGCTGGTAATGAAGACAGAAGGATGATGATTCAGAGGAACAAGATTATTGGAGGGTGCCACGTATTTGAGGTTAACGATGCTACTAATAATAATACTCCTATTCGAATAAGAAATAATGGACCTCTTAGGCCAAACCTGTTTCTCGAAGACAAGAAATGGCCTCCTCGTGAAAGAAATGACAAACCTTATTGGGATGATAAATATTGTCCCCGGAAAAACCTCACAAATTGCTTTATCAATCGAAACCTTCAATTTGACACCCAGGTTCATCATCATGATAAAAAAGATGTGATGCCACATTTAATGAGATATCAGAATCATTTATCAGAAGCAGGTGAAGTCAAAGGTCAATTAGTAGATAGTTTAAAGGAGATGAAGGAACCAGCCAGTTTTCTAAAGCCATGTTTAACCCAAGATTCTGCCAACAACAATCCTGGTCCTCAAGGTAATGATGGAGGAATCAATACAATGTTGTCCCTTTCATTATAA 1236 0.407 MAESERSIYISHENKNEDSNNSSSNIAAKPSSSSFSPSSRLLQKGSLFDLNEEAMDDLGGDVNNGGSYSSSSSGEGNVTSNNSSSEVKERASSSLRQYVRSKMPRLRWTPDLHLAFVRAVERLGGPEKATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQNRATLIMQGQRDNILDMYHRFSAHHQGGGHFGIDDYLPTSPLVMKPMFDFKSHGYSRYPPGSRSSSSVVGWSNNDLGLCEAGNEDRRMMIQRNKIIGGCHVFEVNDATNNNTPIRIRNNGPLRPNLFLEDKKWPPRERNDKPYWDDKYCPRKNLTNCFINRNLQFDTQVHHHDKKDVMPHLMRYQNHLSEAGEVKGQLVDSLKEMKEPASFLKPCLTQDSANNNPGPQGNDGGINTMLSLSL 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0833 411 Pfam Myb-like DNA-binding domain 106 156 IPR001005 -
Acco08g0833 411 Gene3D - 103 160 - -
Acco08g0833 411 MobiDBLite consensus disorder prediction 53 90 - -
Acco08g0833 411 NCBIfam myb-like DNA-binding domain, SHAQKYF class 104 159 IPR006447 GO:0003677
Acco08g0833 411 FunFam Myb family transcription factor 102 160 - -
Acco08g0833 411 SUPERFAMILY Homeodomain-like 102 158 IPR009057 -
Acco08g0833 411 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 79 184 IPR046955 GO:0003700
Acco08g0833 411 MobiDBLite consensus disorder prediction 386 411 - -
Acco08g0833 411 MobiDBLite consensus disorder prediction 63 90 - -
Acco08g0833 411 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 160 IPR017930 -
Acco08g0833 411 MobiDBLite consensus disorder prediction 14 40 - -
Acco08g0833 411 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0833 Acco-ChrAcco08 7473883 7476530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0833 92 186 G2-like Transcription Factor Family AT2G42660 66.316 9.46e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco08g0833 Myb_DNA-binding 6.2e-07 CL0123