Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0831 ATGCGTCCTCCGGTCAAGAAAACCAGCTTTAGCAGAGGTCAGAGCGTGGAAGTTTCCGTCAAGGAAGACGGATTTCATGGATCGTACTTCGAAGCCAAGGTGGTTTCTCAACTCGATAATGGCTTCTACGTCGTTAAGTACGAAACGTTGCTCGATGACCACAACGAGTCCCAATTTCTGACTGAAACTGTTTACCCTAAGGAGCTTCGTCCCCTGCCTCCGGTCATCTCTGTTCGCCGGTTTTCGGTTGATCAGAAGGTCGATGCCTTCGACAACGACGGTTGGTGGCTCGGTGTTGTCACCGGAAAAGATGGTCCCGATAGGTATTTGGTGTACTTCGCTTCAACCGATCAGGAGATCGCGTACCCTTTCTCGCAAATTAGGGTTCATCAGGACTGGATTAACGGCAAGTGGGTTCGGGCTAAGAAAGTTCGATATTAG 441 0.4989 MRPPVKKTSFSRGQSVEVSVKEDGFHGSYFEAKVVSQLDNGFYVVKYETLLDDHNESQFLTETVYPKELRPLPPVISVRRFSVDQKVDAFDNDGWWLGVVTGKDGPDRYLVYFASTDQEIAYPFSQIRVHQDWINGKWVRAKKVRY 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0831 146 Gene3D - 1 81 - -
Acco08g0831 146 Pfam Agenet domain 13 74 IPR008395 -
Acco08g0831 146 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 7 143 - -
Acco08g0831 146 SMART agenet_At_2 8 77 IPR014002 -
Acco08g0831 146 SMART agenet_At_2 79 135 IPR014002 -
Acco08g0831 146 CDD Tudor_Agenet_AtDUF_rpt2_4 85 129 - -
Acco08g0831 146 CDD Tudor_Agenet_AtDUF_rpt1_3 10 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0831 Acco-ChrAcco08 7439918 7440358 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0831 22 133 PHD Transcription Factor Family AT5G58610 27.068 5.69e-09 51.6