Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0827 ATGGATGAGAGACAAAATGATGCAGGGCCTGCAGAAGAAGGGCCATCAAACTCTTCATGGTGGCCATCAGACTTTGTTAAAAAATTTGGATCTGTTTCTCTGGGTTCTCAAGAAGAGACCTTAAATAATAAAGAATCACCTAGACAGTTTGAGCAAAATGTTTTGTCACCTAATAGAGCATCGCAAATTCTCTGGCGCACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTCATTCCCGATAAAAGGCTCAAGGAAATTTTTGATAATATTCCTACTATGGATGAGATTCATGTTTTGGGTGGAGAGGGTCTAAAGGCTGATGTCATTTTGGTGGACACTGAGAAAGATAAAAAATTATCTATGTTGAAGCAATTGATCGTGGCCCTAGTTAAAGGATTGAGCTCTAATCCAGCTGCAATAATAAAAAAGATAGCCGGACTAGTTTCTGATTTTTATAAGCGATCAAATGCGGAAAGTCCAGCAAAAGCTGCACTAGAGGAAAACTCCCACATGTTTGAGAATCGCGGTGCCCAGATACTGGGACAAATAAAGAATGGTTCATGCCGTTGTCGAGCAATCTTATTTAAAGTGTTAGCAGATACTGTAGGTCTTGAAAGTACGCTCATGGTGGGTTTTCCAAATGATGGAGATGTTGAATATGTGGATTCATACAGGCATATGTCTGTGCTTGTTGTATTGAATTCTGTGGAACTGCTGGTTGATCTCATGCGATGCCCTGGTCAATTATTACCTCAATCAAACAAGGAAATTTTCATGACACATATTTCTGCAGCAGGAGAGAGTGATTCTGCAGAAAATGATTCCTGTGATTCACCACTAGAACCAAGCAGTCCTTTATATGGGGTTTTAGATAAAGTGGATCCTGACAGCACTGGAAAGGAGGAGAACCTGTCATTCCAGAGGCGAGTTGACACTACTTCAAATGTATCAGGTCTTTCTTTGCGAAATTTGATGTTACGGTCAAATACCAGTCTGGATAGGAAATTGAGTTTTTCTCATAGTGAACCCAATATTGCAATTGCATTTGGTCGGCGTAGTCGGAGAAAGATCATTGCTGAACAGAGGACCGCTAGCTCCAGTCCAGAGCATCCATCCATCAAAGCACGTGGACAGTCTATTCTTAGCGGTGATAGGAAATCATTCAGAGAGTGTGCTGATAATGAGGCTTCATCAAGGTCAGATGGTGCATCTCCATCAGAAGCTCGTAGGATTAGAAGAAGAAGCATCAGCATTACACCTGAGATCAGTGATGATATCGTAAGGGCTGTACGTGCAATGAATGAAACACTGAAGCAGAATTGTCTTTTGACAGAGCGGGGGGATGATAGCTCATTCTCACCTTCCACAAATGATACAAATAGCGTTGGTAACCTTCAGAAAAATATGTCAAATTTCCATCAAGATGGTCATGAGAGATCTTTGAATTCTCCTCCACCTGATCAAGTAAATTCCCAAAAAGCAATGTCATTACCCTCTTCACCGCATGGTTACAGGGGTCAGACATCTGAGAGAAGTGGACTATCGAGGTATGGAGTGAATGAATTGCAGTCAACATGGAATAAAGTCCTTGAGTCCTCAACGTTTAATAATAAGCCCCTCTTAGCATATGAAGAATGGAATATTGACTTCTCGGAAATAACTGTTGGAACGCGTGTTGGGATTGGGTTTTTTGGAGAAGTCTTCCGTGGTGTATGGAATGGCACAGAAGTTGCGATCAAGGTTTTTCTGGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCAATTCTCAGCCGGCTCCGACATCCAAATGTGATTTTATTTCTTGGGGCGTGCACAAAGCCTCCTCGCTTGTCAATGGTTACTGAGTACATGGAAAGGGGATCACTGTATTATTTGATCCATGTGAGCGGCCAAAAGAAGAAGCTTAACTGGCAGAGAAGACTGAAGATGTTGCGAGATATATGCAGGGGGCTGATGTGCATACACAGAATGAAGATAGTTCACCGTGACCTGAAAAGTGCAAATTGTCTTGTGAACAAGCATTGGACTGTGAAGGTATGTGACTTTGGGCTTTCAAGGATCATGACAGAGTCTAATGTCAAAGACACTTCATCTGCTGGAACTCCAGAATGGATGGCTCCTGAACTTATTCGGAACGAACCATTCAATGAAAAATGCGATATATTTAGCTTGGGGGTGTTGATGTGGGAGCTTTGTACTTTGAGCAGGCCTTGGGAGGGTATTCCACCAGAAAGGGTGGTTTATGCCGTTGCTAACGAGGGGTCTAGACTGGATATTCCTGAAGGCCCGATAGGCAAGCTTATTGCAGATTGTTGGGCAGATCCAAATGAACGGCCGAGTTGTGAGGAGATCCTCTGTCGCTTGCCTGATTGCGAGTAG 2430 0.4247 MDERQNDAGPAEEGPSNSSWWPSDFVKKFGSVSLGSQEETLNNKESPRQFEQNVLSPNRASQILWRTGMLSEPIPNGFYSVIPDKRLKEIFDNIPTMDEIHVLGGEGLKADVILVDTEKDKKLSMLKQLIVALVKGLSSNPAAIIKKIAGLVSDFYKRSNAESPAKAALEENSHMFENRGAQILGQIKNGSCRCRAILFKVLADTVGLESTLMVGFPNDGDVEYVDSYRHMSVLVVLNSVELLVDLMRCPGQLLPQSNKEIFMTHISAAGESDSAENDSCDSPLEPSSPLYGVLDKVDPDSTGKEENLSFQRRVDTTSNVSGLSLRNLMLRSNTSLDRKLSFSHSEPNIAIAFGRRSRRKIIAEQRTASSSPEHPSIKARGQSILSGDRKSFRECADNEASSRSDGASPSEARRIRRRSISITPEISDDIVRAVRAMNETLKQNCLLTERGDDSSFSPSTNDTNSVGNLQKNMSNFHQDGHERSLNSPPPDQVNSQKAMSLPSSPHGYRGQTSERSGLSRYGVNELQSTWNKVLESSTFNNKPLLAYEEWNIDFSEITVGTRVGIGFFGEVFRGVWNGTEVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMERGSLYYLIHVSGQKKKLNWQRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKVCDFGLSRIMTESNVKDTSSAGTPEWMAPELIRNEPFNEKCDIFSLGVLMWELCTLSRPWEGIPPERVVYAVANEGSRLDIPEGPIGKLIADCWADPNERPSCEEILCRLPDCE 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0827 809 SMART serkin_6 557 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0827 809 MobiDBLite consensus disorder prediction 449 516 - -
Acco08g0827 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 676 688 IPR008271 GO:0004672|GO:0006468
Acco08g0827 809 Gene3D Phosphorylase Kinase; domain 1 550 635 - -
Acco08g0827 809 MobiDBLite consensus disorder prediction 1 23 - -
Acco08g0827 809 ProSiteProfiles Protein kinase domain profile. 557 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0827 809 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 335 805 - -
Acco08g0827 809 SUPERFAMILY Protein kinase-like (PK-like) 531 803 IPR011009 -
Acco08g0827 809 ProSitePatterns Protein kinases ATP-binding region signature. 563 584 IPR017441 GO:0005524
Acco08g0827 809 CDD STKc_MAP3K-like 563 805 - -
Acco08g0827 809 MobiDBLite consensus disorder prediction 365 416 - -
Acco08g0827 809 MobiDBLite consensus disorder prediction 272 291 - -
Acco08g0827 809 FunFam Serine/threonine-protein kinase isoform 1 547 635 - -
Acco08g0827 809 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Acco08g0827 809 Gene3D Transferase(Phosphotransferase) domain 1 636 809 - -
Acco08g0827 809 Pfam Protein tyrosine and serine/threonine kinase 558 804 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0827 Acco-ChrAcco08 7361273 7370682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0827 1 809 MAP Kinase Kinase Kinase AT3G58640 68.873 0.0 1141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Acco08g0827 PK_Tyr_Ser-Thr 7.4e-62 CL0016