Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0818 ATGGAAGAATTTAATTGGAGCTCTGGTGTTTGTGAAAATGCCTCAGAGAGAAGTTCTGATTGTTTTCTGGATAACTCTGCTGTAATAGGGAGAAGGTTAGCTTCACCTTCATCTCTGGTATTGGACGGAGAAAAGGAAGAGCTTGTGGCTGCTCCGGTCAAACTGGAACGCAAGATTGTGTCCACTGAGAGAAGTGTTGAAAGTTTGAAGATCCATAGCGAGGCAGAGAGGAGGAGGAGAGCGAGGATTAATGCACATCTTGACACGCTTAGGGGTGTAGTTCCTGGTGCTAAGAAGATGGACAAAGCATCATTACTTGGCGAGGTTATCAGAAATGTGAAAGAGCTGAAAAGGAATGCAGCCCAAGCATGTGAGGGTTTTATGATACCAACGGACAGTGATGAAATAAGAGTTGAAGAACAAGAGGATGGTTCTAATGGCTTCCCTTATTCGATCAAAGCATCACTTTGTTGTGAATATAAACCAGGGTTGTTGCCTGAATTAAGACAAGCACTTGATGCTCTTCATCTTAAGATAATGATGGCAGAAATTGCAACCTTGGGAGGAAGAATGAAGAATGTGTTTGTCATAATTAGCTGTAAAGAACACAACATTGAAGATTCTGCATATCGTCAGGTTCTTGCAGTGTCTGTTCATCAAGCTATTAGGTCTGTTCTTGATAGATTCTCTTGTTCTGAAGATCTGTTAGGAACCAGAAAGAAACGGCGACTTTCTATATTCAGTTCATCACCTTTAGGAGATTTCTTGTGA 771 0.415 MEEFNWSSGVCENASERSSDCFLDNSAVIGRRLASPSSLVLDGEKEELVAAPVKLERKIVSTERSVESLKIHSEAERRRRARINAHLDTLRGVVPGAKKMDKASLLGEVIRNVKELKRNAAQACEGFMIPTDSDEIRVEEQEDGSNGFPYSIKASLCCEYKPGLLPELRQALDALHLKIMMAEIATLGGRMKNVFVIISCKEHNIEDSAYRQVLAVSVHQAIRSVLDRFSCSEDLLGTRKKRRLSIFSSSPLGDFL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0818 256 Gene3D - 63 124 IPR036638 GO:0046983
Acco08g0818 256 PANTHER TRANSCRIPTION FACTOR BHLH30 34 246 IPR045847 GO:0003700|GO:0006355
Acco08g0818 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 119 IPR036638 GO:0046983
Acco08g0818 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 116 IPR011598 GO:0046983
Acco08g0818 256 SMART finulus 73 122 IPR011598 GO:0046983
Acco08g0818 256 Pfam Helix-loop-helix DNA-binding domain 72 116 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0818 Acco-ChrAcco08 7270340 7272139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0818 54 245 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 41.624 1.23e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco08g0818 HLH 4e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0818 08 7270340 7272139 Acco08g0818 08 7270340 7272139 ECH