Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0802 ATGAATATTAGTCCACAGGAGGGCAACAACGTTCGGCCGTTAAACTTTCCGGCAAATTTCCCGAGAAGATCCGACTTCAATGACGGCAATGACGTGAACAGCAGGATCTTGTACGTAGCCATTATCTGCTTATCAATCGTCTTAGTCCTCGTCTTTGCCCTTCATCTCTACGCCAGGTACGTCCTCCGCCGCCAAGCCCGCCATCGCGCAGCCATCCACCATCTCAGCCTCGCTGTGGCTAGATACTCCTCCGGCGCCGACCAGCCCAACAACACTGGCCTCGACCCCACCGTCATTGCCTCTCTTCCCACCTTCGTCTTTAAACGAAGACAGGACAAGTCTCGCAGCCAAAACAAGGACGGCGAAGACAGCCGCCTCCGCCGTGGCGATTCTTCTTCTGTTATGGAATGCTCTGTTTGTTTGAGCAATCTGGAGGATGGAGAAGAAGCGAGGCTGCTTCCTAATTGCAAGCACGTGTTCCACGTGGCTTGTATTGACCAGTGGTTGGCGTCTCATTCGACTTGTCCGATTTGTCGGACCATGGCTAAGCCGGTGATTGAGCCACGGCCGCGTGAGGGTCCGGTCGGGGTCGGGCTGGCCATACCGGTGGTGGAACCCACCGCAGAAGGTACATCGGACGGTGGTGGTGGAGCTAAAAGTAGCGGATCATCATCAGTTTCAAGGCTGAGCTCGTTTAGAAGAATGCTAAGTAGAGAAAGATCGTCCAGAAGAATCCAACCAGCTTCTTCTTCCTCTACCTATGATGATAGTATTGATCGTGATTTGGAGAGACAGTGA 798 0.5326 MNISPQEGNNVRPLNFPANFPRRSDFNDGNDVNSRILYVAIICLSIVLVLVFALHLYARYVLRRQARHRAAIHHLSLAVARYSSGADQPNNTGLDPTVIASLPTFVFKRRQDKSRSQNKDGEDSRLRRGDSSSVMECSVCLSNLEDGEEARLLPNCKHVFHVACIDQWLASHSTCPICRTMAKPVIEPRPREGPVGVGLAIPVVEPTAEGTSDGGGGAKSSGSSSVSRLSSFRRMLSRERSSRRIQPASSSSTYDDSIDRDLERQ 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0802 265 CDD RING-H2_EL5-like 136 179 - -
Acco08g0802 265 ProSiteProfiles Zinc finger RING-type profile. 137 179 IPR001841 -
Acco08g0802 265 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 184 IPR013083 -
Acco08g0802 265 FunFam E3 ubiquitin-protein ligase ATL6 82 184 - -
Acco08g0802 265 SMART ring_2 137 178 IPR001841 -
Acco08g0802 265 SUPERFAMILY RING/U-box 136 187 - -
Acco08g0802 265 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 31 237 - -
Acco08g0802 265 MobiDBLite consensus disorder prediction 214 232 - -
Acco08g0802 265 Pfam Ring finger domain 136 179 IPR001841 -
Acco08g0802 265 MobiDBLite consensus disorder prediction 206 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0802 Acco-ChrAcco08 7129917 7130714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0802 31 265 C3H Transcription Factor Family AT2G42360 42.917 5.69e-51 165