Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0796 ATGCTTTGTTCATGGGGAAGAAGGAGAGAAAAAAGTGTTTCCATGGCAAAACTACCTCCCCAGATCCCAAACACCAAACTTGGTTGGTCCGAACTTCCTAATTCTTCCCCACCGGAGATTCCTTCCGGCGCAAGATTCTCACCGGATAATGCCAATGCTGCCACCGCCACTCAGGGCCCTTTTTGGGCGGATGAATTCCAGGATTTCTGGTTGGTGAGACGCCAAGGCCAATGCCCGTCGGTGAGCGATTACATTACTTTCCTCGAGGATCCCGAGTTGCATGTTGCAAGGAATGTTCGACCCAGGTTTGAGGCTGAGAGTGAGTTTGATAAATTTGATGATGAGAAATTCATGACCATGTTTGATAATGATGAATCTGGGGCTGCTAATCCTCGAACCATGTCCTCAGCAAAATCTTCTAGCCCTTCTGATCATAAAAGCAATATTAAAGATGAGAAAGAAATCACGAACCAAGTCCAACAACACCAGAACCTGCACAATCAGAACGAAGATCAACAACGTCAGCATTTGAAAAACGAGCCTGATGAGGTTGAAACTCAGATAACCAAACAGCAGAAGATACATCCTTCAAATAATACATTAGCAACTTCTTCCTCTGACAAGATCAGTGATCCTAAGAGGGTCAAAAGAATATTGGCAAATAGGAAATCTGCACAAAGATCACGAGTGAGAAAGCTGCAATATATAAACGAGCTAGAACGTAGCGTAACTTCATTACAGGCTGAAGTATCAGTAATGTCTCCAAGGGTTGCATTTTTAGATCGGCAACGCTTGCTTCTAAGTGTTGACAATGATGATCTCAAGCAACGAATCGCTGCCCTCGCCCGAGACAAGATCTTCAAAGATGCTCTTCAAGATGCACTCAGGAGGGAGATAGAGAGGCTAAGGCAAGTTTGTCACCAACAAAAACCCAACAACATCGAAAATGTTGCAGGTTCAACATCCCCCTCACGAAATCCAAAATGTCACGGTCAGGCTGAAACGGAACAGCTTCGCCTCAACGTCTGA 1029 0.448 MLCSWGRRREKSVSMAKLPPQIPNTKLGWSELPNSSPPEIPSGARFSPDNANAATATQGPFWADEFQDFWLVRRQGQCPSVSDYITFLEDPELHVARNVRPRFEAESEFDKFDDEKFMTMFDNDESGAANPRTMSSAKSSSPSDHKSNIKDEKEITNQVQQHQNLHNQNEDQQRQHLKNEPDEVETQITKQQKIHPSNNTLATSSSDKISDPKRVKRILANRKSAQRSRVRKLQYINELERSVTSLQAEVSVMSPRVAFLDRQRLLLSVDNDDLKQRIAALARDKIFKDALQDALRREIERLRQVCHQQKPNNIENVAGSTSPSRNPKCHGQAETEQLRLNV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0796 342 SMART brlzneu 209 273 IPR004827 GO:0003700|GO:0006355
Acco08g0796 342 PANTHER BASIC LEUCINE ZIPPER 34 15 325 - -
Acco08g0796 342 MobiDBLite consensus disorder prediction 126 143 - -
Acco08g0796 342 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 211 263 IPR004827 GO:0003700|GO:0006355
Acco08g0796 342 FunFam Transcription factor VIP1 212 283 - -
Acco08g0796 342 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 216 231 IPR004827 GO:0003700|GO:0006355
Acco08g0796 342 Pfam bZIP transcription factor 213 254 IPR004827 GO:0003700|GO:0006355
Acco08g0796 342 CDD bZIP_plant_RF2 214 264 IPR044759 GO:0003700|GO:0006355
Acco08g0796 342 MobiDBLite consensus disorder prediction 311 336 - -
Acco08g0796 342 Coils Coil 155 175 - -
Acco08g0796 342 Gene3D - 212 283 - -
Acco08g0796 342 SUPERFAMILY Leucine zipper domain 213 267 IPR046347 GO:0003700|GO:0006355
Acco08g0796 342 MobiDBLite consensus disorder prediction 169 189 - -
Acco08g0796 342 MobiDBLite consensus disorder prediction 122 214 - -
Acco08g0796 342 MobiDBLite consensus disorder prediction 190 208 - -
Acco08g0796 342 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0796 Acco-ChrAcco08 7103113 7104743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0796 15 290 bZIP Transcription Factor Family AT3G58120 48.639 3.21e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco08g0796 bZIP_1 2.1e-08 CL0018