Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0776 ATGCTCTTAGAGAAGAAGATGGACGACGGAGAAATCTCAAATATCAGTTTTCCTCAAAACCACCCACCAACCGCCGCATCATCAAACAATACCAATCCTCCTCCGATTCTCAAGAGAAAGAGAAACCTTCCAGGAAACCCTGATCCTGAAGCGGAAGTGATAGCACTATCGCCGAAGACTTTAATGGCGACGAACAGGTTTCTGTGTGAGATTTGTGGGAAAGGGTTTCAGAGGGATCAAAATCTGCAACTTCATAGACGAGGACACAATCTTCCATGGAAGCTGAAGCAGAGGACAAGCAAAGAAGTGAAAAAGAGAGTGTATGTGTGTCCAGAAAAAAGCTGCGTTCACAATCACCCATCGAGGGCTCTGGGAGATTTGACTGGCATCAAAAAGCACTTTTGCAGAAAGCACGGTGAGAAGAAGTGGAAGTGTGAGAAATGCTCAAAGCGTTACGCTGTTCAGTCTGACTGGAAAGCACACTCCAAAACGTGCGGTACTAGGGAATACAAATGTGACTGTGGCACCATCTTTTCACGGAGGGATAGCTTCATAACACATAGGGCCTTCTGTGATGCCCTAGCAGAAGAGACAGCAAGAGTGAATGCAGCATCAAGCATGAGCAACAACATAAGTTACAATAATATAATTGGAGCTGCTACTTCACTAGAACCAAACAACAACAACAATAATATGGCAACCCATTTTCCTTCAATCTTCAAGCCAATTTCAAACACCAATTCCGAGGAAGCAAATAATAATAACCAGACACCTCTTAGAGAACTATCCCTATGGATGGGTCATCATCATTGCCAACAACCTGATCATCAAACAATAATGCCTAGTGACCACCATGGCCAGTTTGTTTCACAATCGCAGCAGCTAAATTGGGTGTTTGGAAACAAGCTTATTACAAGTTCTAATTCTTCTTCCTCTTGTCAAGAGCTAGCAAGCACTTCACTTGGAATGATAAGTGTTCCTTCCTTGTATAGCTCCCAACAACAACAACATTATCATCAGACATCGTTGGCAAACATGTCGGCGACGGCGCTGTTGCAAAAAGCTGCTCAGATCGGAGCAACCTCGACCACATGTGACCCCACATTTCTGGGGAGCTTAGGGTTGAAATGTAGCAGTCAAGGTGGTCATCAAGAAGAAGATGATCATGGGAGTAACAAGTATAATTATGGGATGTTCTGTTCGGGTTCGGTTATCACCAATGTTCGTGGTGGTGGTGGTGGAGGAAGTGATCAGACGACAGAGAACAACAAGTCAGCAAGTGAAATGTCACAAATGCACCCAGCGAAACGCCCAAGGCAGGTATTACAACAACAGAATGAAGGAGGAGAAACTAGGGATTTCCTTGGTGTTGGTGGTAGTGTACAAACCATTTGCCAGCCTTCATCAATAAATGGATGGGTCTGA 1425 0.4435 MLLEKKMDDGEISNISFPQNHPPTAASSNNTNPPPILKRKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVKKRVYVCPEKSCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAASSMSNNISYNNIIGAATSLEPNNNNNNMATHFPSIFKPISNTNSEEANNNNQTPLRELSLWMGHHHCQQPDHQTIMPSDHHGQFVSQSQQLNWVFGNKLITSSNSSSSCQELASTSLGMISVPSLYSSQQQQHYHQTSLANMSATALLQKAAQIGATSTTCDPTFLGSLGLKCSSQGGHQEEDDHGSNKYNYGMFCSGSVITNVRGGGGGGSDQTTENNKSASEMSQMHPAKRPRQVLQQQNEGGETRDFLGVGGSVQTICQPSSINGWV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0776 474 Gene3D Classic Zinc Finger 100 191 - -
Acco08g0776 474 SMART c2h2final6 143 163 IPR013087 -
Acco08g0776 474 SMART c2h2final6 67 89 IPR013087 -
Acco08g0776 474 SMART c2h2final6 108 138 IPR013087 -
Acco08g0776 474 MobiDBLite consensus disorder prediction 1 49 - -
Acco08g0776 474 MobiDBLite consensus disorder prediction 410 443 - -
Acco08g0776 474 MobiDBLite consensus disorder prediction 13 36 - -
Acco08g0776 474 MobiDBLite consensus disorder prediction 412 430 - -
Acco08g0776 474 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 25 462 IPR031140 -
Acco08g0776 474 FunFam protein indeterminate-domain 5, chloroplastic-like 121 200 - -
Acco08g0776 474 Gene3D Classic Zinc Finger 63 90 - -
Acco08g0776 474 ProSitePatterns Zinc finger C2H2 type domain signature. 69 89 IPR013087 -
Acco08g0776 474 ProSiteProfiles Zinc finger C2H2 type domain profile. 67 89 IPR013087 -
Acco08g0776 474 SUPERFAMILY beta-beta-alpha zinc fingers 66 163 IPR036236 -
Acco08g0776 474 FunFam protein indeterminate-domain 12-like 46 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0776 Acco-ChrAcco08 6916946 6919181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0776 34 474 IDZ Gene Family AT1G03840 54.433 2.02e-148 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco08g0776 None None None