Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0773 ATGGCTGGTGATTTCTTCGAGGGCATTGAGCTTTTGTTCTCTTCAAATCCCTTCCACCTTGCGCCTGAAGACACGAAGAAGCGCCTCTCTCCTCTCACCATGCTCCTCCCCCTCCTCCTACTCTTTCTCTCTCCTGCCTTTACTCTCTCTTTAACTCAAGACGGTCTCTTCCTTCACGAGGCCAAGCTTCAACTCTCCGATCCCGGGAATGTTCTTTCGAACTGGAACTTCCGTGATGCCACCCCCTGCAACTGGTCCGGTGTCACCTGCGACATTCACTCCGGCGACGTCACTTCTCTCGACCTTTCCAACGCGCAGCTACAGGGACCATTCCCCACCATCCTTTGCCGCCTTCCTTCTCTCACAAACATCTCCTTCTTCGACAACTTGATCAACTCTTCCCTTCCCGCCGGTATCTCCAACTGTAGCAATCTCCAGTTTCTCAATCTCTCTCAGAATGCCCTCGTGGGCTCCATCCCAGACACGCTCTCGCAAATTTCAAGTCTGCGGCATCTGGACCTCTCTTTCAATAACTTCTCCGGCGACATTCCGGTGTCTTTTGGTCAGTTCCAGGGGCTCGAATTGCTTGAGCTCGTTTCGAATCTTTTCAACGGGACAGTACCGAGTTCTCTGGGTAACATTTCTTCCCTCAGAGTTCTTCGACTTGCTTATAACTCCTTTGCTCCGAGTCCTATACCGGTTGAATTTGGTAACCTGAAGAACATCGAGGAACTATGGCTCGCTTCTTGTAACCTCGTTGGTTCGATTCCGGCATCGTTGAGTCGTCTCACTCGGCTCGGGAACCTGGATTTGTCCCAAAACAGACTCAATGGGTCTATTCCGGAATTTATTGTGGGGATGAAGAGCCTTGTTCAAGTTGAGCTATATCAGAACTCACTCTCTGGCAAGTTGCCCGTCGGAATGTCAAAGTTGACGAATCTGAGACGCTTCGATGCGTCGACGAACATGTTGACTGGGACGATACCTGACGAGTTGTGCCGGTTGAATCTCGAATCTCTTAATTTGAACGACAATCAACTTGTTGGGCATTTACCAGAGAGCATAGCTCTTTCTCCGAATTTGCAGGAGCTCAAATTGTATAACAATACGCTTACAGGGAGGTTGCCAAGTGCTCTTGGTAACAACTCGAAGCTCATGATTCTTGATGTTTCGTACAATCAGTTTTATGGTGAAATACCGGAAACTTTGTGTGAAGGAGGCGAGTTGGAAGTCCTGATTTTAATTTACAATTCATTTTCCGGGAAAATTCCTCAGATTCTGGGTGACTGCACGAGCTTAAAAAGGGTACGACTGAGGAATAACAATCTCTCAGACATAGTTCCTGATGCTCTCTGGGGTCTACCTCATGTGTATTTGCTGGAGGTTGTTCATAATTCTCTTTCTGGGCAAATTTCCAGCAAAATAAGTGGTGCTCGTAATCTGTCACAGTTGCTAATTTCGAACAACCAATTTTCTGGTTCGATACCTGATGAGATTGGGTCGTTGAATAATCTTGTTGAATTTGATTGCAGCAATAATACATTCTCTAATCAGATTCCGGCCAGTATAGTCAAGCTGAGCCAGTTGGGAAGGATTGATCTCAGTTACAATAAACTTTCCGGAACAATACCTGGAGAACTTAGTGAATTGAATAAGCTCAATGAGCTTAACTTGGCAAACAATATGCTTGATGGGAATATTCCAGGGGAAATAGGGAGCTTGCCTGTGCTCAATTATCTTGATCTTTCACGCAATCAGTTATGTGGTGATATTCCTCTCCAGTTGCAAAATTTGAAGCTCAATTCACTGAATTTGTCATACAATCATCTTTCTGGGAGAATTCCTTTTCTTTACGATAATGAGAATTACAGAAAGAGTTTCATAGGGAATCAAGGCCTTTGTGGTAATCTCTATGGACTTTGTCGAAACTATGCTGAAAGTAAGAACCTCAGGAACCCGTGGCTTTTCCGGTCAATATTTGTACTTGCTGGTATTGTATTTGTTGTTGGGGTTGCATGGTTTTACTTCAAATACCGGAACTTAAAGAAGTTGAGAAAAGGACTAAACATTTCAAAGTGGAGGTCATTTCACAGGTATGGATTTAGCGAGCTTGAGATTGTTAAATTGCTAAGTGAAGATAACGTAATTGGGAGCGGAGCATCTGGAAGGGTCTACAAAGTAGTGCTTAGCAATGGCGAGATAGTGGCAGTGAAGAAACTCTGGAGGGCAACTAAGAAAGAAAATGAAAATGTTGATCCTAATAAAGATGAATTCGAAGTTGAAGTTGAGACACTGGGAAAGATCAGACACAAGAATATTGTAAGGCTATGGTGTTGCTGCAAGACAGGGGATAGCAAGCTTCTAGTCTATGAATATATGCCAAATGGAAGCTTGGCTGACATACTTCACGGTAGCAAGAAAAGCTTGTTGGATTGGCCAACCAGATATAAGATTGCCATTGATGCTGCTGAGGGACTTTCTTATTTGCACCACGATTGTGTCCCACCAATTGTTCACAGGGACGTGAAGTCTAACAATATATTGCTGGATGGAGAGTTCGGGGCAAAAGTTGCAGATTTTGGTGTGGCCAAAATATTTAGAGGAATCAGCCAAGGCGGAGAATCCATGTCTGTCATTGCTGGATCTTATGGTTACATTGCCCCAGAGTATGCCTACACTCTTCGGGTGAATGAAAAAAGTGATATATATAGTTTTGGCGTGGTTATTCTTGAACTGGTCACCGGAAAACCCGCCGTTGATTCAGATTATGGAGATGAAGATTTGGTGAAATGGGTTTCCAAAACATTGGACCAGAAAGGAATAGACCAAGTGATTGATCCATATCTGGATTCAAAACATGAAGAACAAATCAGCAAGGTACTCAAAATAGGGCTTCTGTGCACAAGCAGTGTTCCTATAACACGACCTTCCATGCGTCGAGTGGTAAAAATGCTACAGGAAGCTTCTGGAGATCCCAAGTCCAGAAGTGTGAAGAGGGACGGAAAACTGACCCCTTATTATCACGAGGAAGCATGTGATCAGGGAAGCATAGTCTAA 3057 0.4426 MAGDFFEGIELLFSSNPFHLAPEDTKKRLSPLTMLLPLLLLFLSPAFTLSLTQDGLFLHEAKLQLSDPGNVLSNWNFRDATPCNWSGVTCDIHSGDVTSLDLSNAQLQGPFPTILCRLPSLTNISFFDNLINSSLPAGISNCSNLQFLNLSQNALVGSIPDTLSQISSLRHLDLSFNNFSGDIPVSFGQFQGLELLELVSNLFNGTVPSSLGNISSLRVLRLAYNSFAPSPIPVEFGNLKNIEELWLASCNLVGSIPASLSRLTRLGNLDLSQNRLNGSIPEFIVGMKSLVQVELYQNSLSGKLPVGMSKLTNLRRFDASTNMLTGTIPDELCRLNLESLNLNDNQLVGHLPESIALSPNLQELKLYNNTLTGRLPSALGNNSKLMILDVSYNQFYGEIPETLCEGGELEVLILIYNSFSGKIPQILGDCTSLKRVRLRNNNLSDIVPDALWGLPHVYLLEVVHNSLSGQISSKISGARNLSQLLISNNQFSGSIPDEIGSLNNLVEFDCSNNTFSNQIPASIVKLSQLGRIDLSYNKLSGTIPGELSELNKLNELNLANNMLDGNIPGEIGSLPVLNYLDLSRNQLCGDIPLQLQNLKLNSLNLSYNHLSGRIPFLYDNENYRKSFIGNQGLCGNLYGLCRNYAESKNLRNPWLFRSIFVLAGIVFVVGVAWFYFKYRNLKKLRKGLNISKWRSFHRYGFSELEIVKLLSEDNVIGSGASGRVYKVVLSNGEIVAVKKLWRATKKENENVDPNKDEFEVEVETLGKIRHKNIVRLWCCCKTGDSKLLVYEYMPNGSLADILHGSKKSLLDWPTRYKIAIDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGEFGAKVADFGVAKIFRGISQGGESMSVIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKPAVDSDYGDEDLVKWVSKTLDQKGIDQVIDPYLDSKHEEQISKVLKIGLLCTSSVPITRPSMRRVVKMLQEASGDPKSRSVKRDGKLTPYYHEEACDQGSIV 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0773 1018 FunFam Receptor-like protein kinase HSL1 337 643 - -
Acco08g0773 1018 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 217 987 - -
Acco08g0773 1018 SMART LRR_typ_2 526 550 IPR003591 -
Acco08g0773 1018 SMART LRR_typ_2 118 142 IPR003591 -
Acco08g0773 1018 SMART LRR_typ_2 311 335 IPR003591 -
Acco08g0773 1018 SMART LRR_typ_2 263 287 IPR003591 -
Acco08g0773 1018 SMART LRR_typ_2 166 190 IPR003591 -
Acco08g0773 1018 SMART LRR_typ_2 430 453 IPR003591 -
Acco08g0773 1018 SMART LRR_typ_2 574 597 IPR003591 -
Acco08g0773 1018 SMART LRR_typ_2 359 382 IPR003591 -
Acco08g0773 1018 Gene3D Ribonuclease Inhibitor 52 205 IPR032675 -
Acco08g0773 1018 ProSiteProfiles Leucine-rich repeat profile. 336 358 IPR001611 GO:0005515
Acco08g0773 1018 SUPERFAMILY Protein kinase-like (PK-like) 709 986 IPR011009 -
Acco08g0773 1018 SMART serkin_6 710 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0773 1018 FunFam Leucine-rich receptor-like protein kinase family protein 232 330 - -
Acco08g0773 1018 FunFam Receptor-like protein kinase HSL1 694 792 - -
Acco08g0773 1018 Pfam Leucine rich repeat N-terminal domain 53 91 IPR013210 -
Acco08g0773 1018 Gene3D Ribonuclease Inhibitor 309 644 IPR032675 -
Acco08g0773 1018 Gene3D Phosphorylase Kinase; domain 1 692 792 - -
Acco08g0773 1018 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 51 214 - -
Acco08g0773 1018 Pfam Leucine rich repeat 168 226 IPR001611 GO:0005515
Acco08g0773 1018 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
Acco08g0773 1018 SUPERFAMILY L domain-like 333 618 - -
Acco08g0773 1018 Pfam Protein kinase domain 712 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0773 1018 ProSiteProfiles Protein kinase domain profile. 710 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0773 1018 Gene3D Ribonuclease Inhibitor 206 307 IPR032675 -
Acco08g0773 1018 ProSitePatterns Protein kinases ATP-binding region signature. 716 739 IPR017441 GO:0005524
Acco08g0773 1018 Gene3D Transferase(Phosphotransferase) domain 1 793 1007 - -
Acco08g0773 1018 SUPERFAMILY L domain-like 65 396 - -
Acco08g0773 1018 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 793 1002 - -
Acco08g0773 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0773 Acco-ChrAcco08 6897212 6901200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0773 48 1018 Receptor kinase-like Gene Family AT1G28440 60.000 0.0 1162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco08g0773 Pkinase 7.6e-47 CL0016