Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0771 ATGGGTGTGGACTATTACAAGATCTTGCAGGTCGACAAGAATGCCAAAGACGACGACTTGAAGAAGGCTCACAGGAAGCTTGCCATGAAATGGCATCCTGATAAGAACCCCGATAACAAGAAAGAAGCTGAAGCTAAATTCAAGCAAATTTCTGAAGCCTACGACGTTCTGAGTGATCCACAAAAGAGAGCCGTCTATGATCAGTATGGTGAAGAGGGTCTGAAGGGTGGGGTTCCGCTTCCCGATGCCGGAGGGGCTTCTTTCTTTCCAACGGGAGAAGGAACGACGTCGTTTAGGTTCAATCCTAGACACGCCGACGACATTTTTGCAGATTTTTTTGGGTTTTCGAGCCCATTTGAAAATAGTAGTGGCTATGGAGGGATGAGGTCCAGGTTCTCGAGTGGGATTTTTGGCGATGATATGTTCGGATCATACGGAGATGCAAGAGGGGGAGTCCATATGAGTCCAGGTGGTCCTCGAAAAGCTCCTCCTATTGAGAACAGATTGCCCTGTAATCTCGAAGAATTGTACCAGGGAACTACAAAGAAGATGAAGATCTCCAGAGAAATCGCTGATGCTAGTGGCAAAACCATGCCTGTGGAAGAGATCCTAACTATCAACATCAAGCCTGGTTGGAAGAAGGGTACGAAGATAACCTTCCCAGAGAAAGGAAATGAGCAGCCAAATGTGACCCCGGCAGACCTTGTTTTTATCATTGACGAAAAGCCTCACAGTATTTTCACTCGTGATGGAAATGATCTGGTTGTGACGCAAAAGATCTCTCTGGCGGAGGCCTTGACCGGTTATACAGTACAGCTGACTACCTTGGATGGAAGGAACCTGACCATACCAATCACCAATGTGATTCATCCAACCTACGAGGAGGTTGTTCCAAGAGAAGGAATGCCACTCCAGAAGGATCCCACAAAGAAGGGAAACTTGAGGATTAAGTTCAACGTTAAGTTCCCGACTCGGCTGACATCAGAGCAGAAGGCAGGAATCAGGAAACTCCTGGGTGCCTCACCCTGA 1029 0.4742 MGVDYYKILQVDKNAKDDDLKKAHRKLAMKWHPDKNPDNKKEAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGGVPLPDAGGASFFPTGEGTTSFRFNPRHADDIFADFFGFSSPFENSSGYGGMRSRFSSGIFGDDMFGSYGDARGGVHMSPGGPRKAPPIENRLPCNLEELYQGTTKKMKISREIADASGKTMPVEEILTINIKPGWKKGTKITFPEKGNEQPNVTPADLVFIIDEKPHSIFTRDGNDLVVTQKISLAEALTGYTVQLTTLDGRNLTIPITNVIHPTYEEVVPREGMPLQKDPTKKGNLRIKFNVKFPTRLTSEQKAGIRKLLGASP 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0771 342 PRINTS DnaJ domain signature 6 24 IPR001623 -
Acco08g0771 342 PRINTS DnaJ domain signature 24 39 IPR001623 -
Acco08g0771 342 PRINTS DnaJ domain signature 62 81 IPR001623 -
Acco08g0771 342 PRINTS DnaJ domain signature 42 62 IPR001623 -
Acco08g0771 342 CDD DnaJ_C 163 326 - -
Acco08g0771 342 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Acco08g0771 342 CDD DnaJ 4 59 IPR001623 -
Acco08g0771 342 Gene3D - 244 324 - -
Acco08g0771 342 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 338 - -
Acco08g0771 342 Gene3D DnaJ domain 3 124 IPR036869 -
Acco08g0771 342 SUPERFAMILY Chaperone J-domain 3 99 IPR036869 -
Acco08g0771 342 Pfam DnaJ C terminal domain 165 323 IPR002939 -
Acco08g0771 342 FunFam DnaJ subfamily B member 13 244 324 - -
Acco08g0771 342 SUPERFAMILY HSP40/DnaJ peptide-binding domain 158 254 IPR008971 GO:0006457|GO:0051082
Acco08g0771 342 FunFam Dnaj homolog subfamily b member 161 242 - -
Acco08g0771 342 SMART dnaj_3 3 62 IPR001623 -
Acco08g0771 342 SUPERFAMILY HSP40/DnaJ peptide-binding domain 247 332 IPR008971 GO:0006457|GO:0051082
Acco08g0771 342 FunFam DnaJ subfamily B member 13 3 123 - -
Acco08g0771 342 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Acco08g0771 342 Gene3D - 164 242 - -
Acco08g0771 342 Pfam DnaJ domain 4 67 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0771 Acco-ChrAcco08 6859394 6862191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0771 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 5.16e-09 55.8