Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0769 ATGATTGCGGTGTCACCTTTGAGGGGAACCAGAGTTGAGATTAAAAGCCAGGGAGAGATGGGTGGTTTCTCATCTATCGTTGGAGAAGATGAAGAGTTTGGAGAATTTTCCGATGGGAGTTTATTGGAAAGTATTAATTTTGATGATCTTTTTGTCGGTATCAACGTCGGCGCTGGAGATGAGCTGCCGGATTTTGAGATGGGCCGGGAAATCCTCTTCGAGTTCACCATGGAGTCGTCGGAGAACATGAACTGCTCGTCCTTGCTTTCACTGGAAAATAATAATGATAATGGAGCTGATCAACACGAGAACAGTATTGTAAATGGGAAGGAGGAGGATGAAGAAGAAGAAGATTGTAATAATAAAGTTTCGTCAGCTTCAGCTTCAAATTCTGGGTCAAGTAGGGCAGAAGAAGAGATTTTGAACAAAAGAGATGAAACTGCGACTGCGACGTCGTTGAAGCCATCGGCGACGACGAAGAAAGCTGAGCAAAAGGGAAGAAAATCTTCAGGCCAATCTAAAAATTCACAAGGGAAGAGAAAGGTGAAGGTGGATTGGACCCCAGAATTACACAGACGATTTGTGCAGGCAGTGGAGCAGCTTGGACTAGACAAGGCAGTTCCTTCCAAAATCTTAGAGATCATGGGAATTACTTGTCTAACTCGCCACAACATCGCCAGCCACCTCCAAAAATATCGATCGCATAGGAAGCATTTGCTGGCACGTGAAGCTGAAGCAGCAAGGTGGAATAAGGGGAGAGAGGTAAGACCATGGGCGGCGGCAGCGCCCACCGTGGGTTTCCCTCATATGGCTCCTCCTCCGTCGCCGTCCACGATGCCGCCCCAATATTTTAGACCCTTGTATGTATGGGGCCATCCCACGATGGACCATTACTCCTTCATGGCCCGCTGGCCGCCGCCCCCGGCCTGGCCATGCCCAACCGCTCCTCCGCCGCCGCCTCCGGGCCCTTCATTCTGGCACCATCGCCACCATCAGCAGGCTGATCCCCAAGCACTAACCCCAGGAATAGGAACATACTGTTTTCCACCACTAACACCTCTGATTACGACGGGATTTGGATCTCCAATACCTGTCCCTGGCATCCCTCCCCACGGCATGTTCACGGCAGACTCTGATGTCGGATCACCAACCGGGCAACCAGCTGCCAGTCCACGGCCCTTCTTTGACTTCCACCCGTCAAAGGAAAGCATAGATGAAGCTCTTGGAGATGTTATTTCAAAACCACGGCTTCCACTTCCTCTAGGGCTTAAAGCCCCGGCGCTTGATAGTGTGTTGAGCGAATTACAGAGACAAGGAATTCCCAAGATTCCTCCCTCTTGTGCTTGA 1347 0.5033 MIAVSPLRGTRVEIKSQGEMGGFSSIVGEDEEFGEFSDGSLLESINFDDLFVGINVGAGDELPDFEMGREILFEFTMESSENMNCSSLLSLENNNDNGADQHENSIVNGKEEDEEEEDCNNKVSSASASNSGSSRAEEEILNKRDETATATSLKPSATTKKAEQKGRKSSGQSKNSQGKRKVKVDWTPELHRRFVQAVEQLGLDKAVPSKILEIMGITCLTRHNIASHLQKYRSHRKHLLAREAEAARWNKGREVRPWAAAAPTVGFPHMAPPPSPSTMPPQYFRPLYVWGHPTMDHYSFMARWPPPPAWPCPTAPPPPPPGPSFWHHRHHQQADPQALTPGIGTYCFPPLTPLITTGFGSPIPVPGIPPHGMFTADSDVGSPTGQPAASPRPFFDFHPSKESIDEALGDVISKPRLPLPLGLKAPALDSVLSELQRQGIPKIPPSCA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0769 448 NCBIfam myb-like DNA-binding domain, SHAQKYF class 181 235 IPR006447 GO:0003677
Acco08g0769 448 MobiDBLite consensus disorder prediction 122 136 - -
Acco08g0769 448 MobiDBLite consensus disorder prediction 377 396 - -
Acco08g0769 448 Pfam Myb-like DNA-binding domain 184 233 IPR001005 -
Acco08g0769 448 SUPERFAMILY Homeodomain-like 179 238 IPR009057 -
Acco08g0769 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 178 237 IPR017930 -
Acco08g0769 448 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 447 IPR044825 GO:0003700|GO:0045893
Acco08g0769 448 Gene3D - 178 239 - -
Acco08g0769 448 MobiDBLite consensus disorder prediction 109 184 - -
Acco08g0769 448 FunFam Two-component response regulator 177 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0769 Acco-ChrAcco08 6834752 6838557 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0769 1 294 G2-like Transcription Factor Family AT5G44190 38.730 1.21e-50 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco08g0769 Myb_DNA-binding 3.7e-08 CL0123