Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0746 ATGGTATGCCTGAGATTCGACATGGTTGCCGGTAGAAGATTGGTCTCCTGGTTGAGTAAGAGAAAGGGGTTAGGGTTTGTATTGCAGGTTGCGTTTTGGTGTTTGGCTGTTCTGTTGTTTATTCGTCCCGTGGCGGGTCTGAGACCACTAAGGGAGAGAACTCGGTCGTGGGGCGATGAGTGGCTAATCACAAGAAAAGTGGAAAGTGAGCTAGGTCCATTTTCACAATGGAACATAACAGGAACATACAAAGGAACTTGGAAATTTTTAGATACCACCAATGGCTCTTCCAGATTTCCTGACATCAGAAAAACAAATGGCAATACTGTAATTGAATTAATTAGTACGCCCACAAAAATAAATGGTGTGCATTATGTGCAGGGAGTAGTTATATTCCATGATGTGTTTGACAATGAGTACAATGTTGGTGGTGCTCAAATCAGAGTAGAAGGTGTATATGTATGGCCTTTTAGACAGCTTCGAATGGTAGCCAGCCGTGGAAAAGAGGGAGAGTTAAATCAGGGTGAAGATAATATTTTATCTAATCCATATCATCTGCTTGGAGTCTTCTCATCCCAAGTATTCCAAGAATCTTCACGAGATAAGATGTGGAGAAGAAAGCATTCTCAAATATATGATGTGGAGAAACGTTGCAATTTTGAAATTGCTGCACAAATTTCACGACTGTCATCATCAAAAAATGATGGGGATCAGGACCTTTTCCATCTTGAAGGGCTAACAGAGAGTCCCTCAACCGATGATGGGGACTGCTTCTCACCTCTACTGCTAAATGCAACTTCAGTTAACATTGAGGTCTACTATAACAAAGCAGTGAACTACACTTTGATGGTTACCTTTGTGTCTTTCTTGCAAGTTCTCTTATTGATTCGACAAATGGAGCATAGCAACACTCAATCTGGAGCTGCCAAGGTTTCAATTTTTATGATTGGCCAACAGGCAATCATGGATGCTTATCTATGCCTTTTACATCTGACTGCTGGGATACTAGTTGAATCTTTGTTCAATGCTTTTGCAACTGCTGCTTTTTTCAAGTTTGTGGTCTTCTCAATATTTGAGATGAGATATCTCCTTGCCATATGGAAGGCAAGTAGGCCTTTCAACAATGGGGACGGTTGGGAAACAATGAGACGGGAGCTTTCAGTTTTATACAGTCGTTTCTATGGGATCCTGCTGGGTGGCATTCTACTCATGTATGAGTTTCATAGTTATTTGAGACCTATTTTTCTTCTTATGTACTCCTTTTGGATACCTCAAATTATCACCAATGTTGTTCGTGATTCACGCAAACCGTTGCATCCTCATTACATCCTAGGGATAACCATCACTCGGCTGGCAATCCCATTATATATTTTCGGTTGCCCTAACAATTTCATGCGCATCGAACCCCACAAGAGCTGGTGTATTTGTTTGGTTGTATTTGTTGGATTTCAAGCAGGAGTTCTTTTGCTTCAGCACTACCTTGGATCCCGTTGGTTTATTCCTCGACAGATTCTGCCTGAGAAATACAGCTATTATAGGAGGCTTGATCAAGACAGAAGCCATGCTTCAGACTGTGTTATTTGCATGACGGCCATTGATTTTTCTCAGCGATCCAATGAATGCATGGTAACACCTTGCGATCATTTCTTCCACTCTGGTTGTTTGCAAAGATGGATGGATGTAAAGATGGAGTGTCCAACTTGCCGGCGGCCGCTGCCTCCTGCCTAG 1728 0.4201 MVCLRFDMVAGRRLVSWLSKRKGLGFVLQVAFWCLAVLLFIRPVAGLRPLRERTRSWGDEWLITRKVESELGPFSQWNITGTYKGTWKFLDTTNGSSRFPDIRKTNGNTVIELISTPTKINGVHYVQGVVIFHDVFDNEYNVGGAQIRVEGVYVWPFRQLRMVASRGKEGELNQGEDNILSNPYHLLGVFSSQVFQESSRDKMWRRKHSQIYDVEKRCNFEIAAQISRLSSSKNDGDQDLFHLEGLTESPSTDDGDCFSPLLLNATSVNIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSIFMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPFNNGDGWETMRRELSVLYSRFYGILLGGILLMYEFHSYLRPIFLLMYSFWIPQIITNVVRDSRKPLHPHYILGITITRLAIPLYIFGCPNNFMRIEPHKSWCICLVVFVGFQAGVLLLQHYLGSRWFIPRQILPEKYSYYRRLDQDRSHASDCVICMTAIDFSQRSNECMVTPCDHFFHSGCLQRWMDVKMECPTCRRPLPPA 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0746 575 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 511 575 IPR013083 -
Acco08g0746 575 ProSiteProfiles Zinc finger RING-type profile. 525 569 IPR001841 -
Acco08g0746 575 Pfam Ring finger domain 524 569 IPR001841 -
Acco08g0746 575 CDD RING-H2_TUL1-like 520 574 - -
Acco08g0746 575 SMART ringv_2 524 569 IPR011016 GO:0008270
Acco08g0746 575 SMART ring_2 525 568 IPR001841 -
Acco08g0746 575 FunFam E3 ubiquitin-protein ligase, putative 511 575 - -
Acco08g0746 575 PANTHER RING ZINC FINGER PROTEIN 133 574 - -
Acco08g0746 575 SUPERFAMILY RING/U-box 512 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0746 Acco-ChrAcco08 6626038 6635148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0746 516 573 C3H Transcription Factor Family AT1G53010 36.667 4.94e-08 51.6