Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0738 ATGAATTCAACCACCATCGTCTTCAGAAACTCAAAAAGTAGCTTCTTCGCAGAATTGGCAACCATAATGGAAGCTCAAGGAAGCCATAACCAGCCTCCTCCGCCGCCGACCAAAGTCGAAAGAAAAATCATTGAGAAAAACAGAAGAAACCAGATGAAGTTCCTCTACTCTAAGCTCAATTCTCTCCTCCCAAACCACAATCCCAAGGAACTACTGCAACTGCCTGATCAGATAGATCAGGCGATAAACTACATAAAGAGTTTGGAGGCGAAGGTGAAGATGGCTCAAGAGAAGAAAGAAAGCTTGAAGGAAAAGAAAAGGTCACTAGCTAGCTGCTCAAGTAGTGCTATTGACATTAATAAGAACAAAAGTGTGCTGAGATCACCTGAAATTGAGATTCGTGAAGTGGGTTCATCTCTAGAGATTGTTATGATCACAGGATTAGATAACCAGTTCGTTTTCTATGAGATCATTCGAATACTCCATGAAGAGAACATAGAGGTCGTTAGTGCTAACTCTTCCCTCTTTGGTGACTCAATGCATCACGTAGTGCATGCAGAGATTGGGCAATCGTCGCTTGAATTCGGAGCAACCAAGGAAAGCCAGAGGCTAAAAAGATTTGTGTATGGATCATCAAGTGATGTGGAAATCAATCCGGAGTTGTGGGATTTTGACAACATTGCTTCTGAACCCTGGCACTTCTAA 705 0.4241 MNSTTIVFRNSKSSFFAELATIMEAQGSHNQPPPPPTKVERKIIEKNRRNQMKFLYSKLNSLLPNHNPKELLQLPDQIDQAINYIKSLEAKVKMAQEKKESLKEKKRSLASCSSSAIDINKNKSVLRSPEIEIREVGSSLEIVMITGLDNQFVFYEIIRILHEENIEVVSANSSLFGDSMHHVVHAEIGQSSLEFGATKESQRLKRFVYGSSSDVEINPELWDFDNIASEPWHF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0738 234 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 37 208 - -
Acco08g0738 234 FunFam Transcription factor bHLH162 28 114 - -
Acco08g0738 234 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 36 112 IPR036638 GO:0046983
Acco08g0738 234 Coils Coil 78 105 - -
Acco08g0738 234 Gene3D - 29 116 IPR036638 GO:0046983
Acco08g0738 234 SMART finulus 42 94 IPR011598 GO:0046983
Acco08g0738 234 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 36 88 IPR011598 GO:0046983
Acco08g0738 234 Pfam Helix-loop-helix DNA-binding domain 38 89 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0738 Acco-ChrAcco08 6516516 6517573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0738 39 208 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 39.560 4.24e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco08g0738 HLH 1.9e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0738 08 6516516 6517573 Acco08g0738 08 6516516 6517573 ECH