Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0733 ATGTCTTCCCCTCTCATCTTTCTCCTTTTCCTCCTCAGTTCATCTTCAGCTACTGAATTCATCTACAACACCAACTTCAACTCTTCCAACATCCTTCTCTCCGGCAATGCTTCCCTCGATTCTTCAATTCTCACCCTCACCAACCTCACCTCCTTCTCCATAGGTCGAGCTTTTTACCCTTTCAAAATACCCACTAAACCCTCTAATTCTTCTTCTTCCCCTTTACCATTCTCAACCTCCTTCATTTTCTCTATTTCCCCTTTTAAAAATGTTCTCCCTGGACATGGATTCGTCTTCCTTCTCTCTCCTTTCACAGGAACAACCGGAGTAAGCTCTGCACAGCATTTGGGTCTCTTCAATCTCACCAATGACGGTAATCCCGACAACCATGTTTTTGGGGTTGAATTTGATGTGTTTAAGAACCAAGAGTTTAATGATATCGATGATAATCATGTGGGTTTGGATATAAATTCGCTTACTTCTTTTAATTCGCATGCTGCGGGTTATTGGGTTGGGGAAGATGATGGGGAGTTTGAGGTTTTGAAACTTAATGACGGGGATAACTATCAAGTTTGGATTGATTATCGGGACTCTAGAGTTAATGTCACTATGGCTCCTGTAGGAAGAAAGAGGCCTCGAAGACCCTTGATTAGTGAGCTTGTTAATCTTTCTTCGGTTCTTTTGGATGAAATGTATGTGGGATTTTGTGGGGCAACAGGGCAATTGATGGAGAGTCATAAAATTTTGAGCTGGAGCTTTAGTAATTTGAATTTTTCGATTGGTGATGCTTTGGTGACTTCAAATTTGCCTTCTTTTTTACTTCCTAAAAGATCAGTTACAAGGTCAAAAGGTTTTATTATAGGAGTCAGTATGGGCGTCTTCTTTGTCATTGGCGTTGCTAGTGTTATATTTGTACGTTTTCTTGGAGGGAAAACTAACAAAAGAAACGAGGAAGAGACTGAAGATTGGGAAATAGAGTATTGGCCGCACCAAATAAGTTATGAAGATATTTCTGCTGCCACTAAAGGATTTTCAGACCAAAATGTGGTTGGGTTTGGAGGGAATGGGAAAGTCTATAGAGGGATTTTACAAGGTGTAGAAGTTGCAGTAAAAAGAATCCCTTGTGAGAGTGAGAAAGGCATGAGGGAATTTCTGTCTGAAATCTCAAGTTTAGGCAGATTGAAGCACAGGAATGTGGTGCCACTGAGAGGTTGGTGTAAAAAAGAGAGAGGAAATTTGATTTTAGTCTATGACTATATGAGCAACGGAAGTTTAGACAAAAGGATATTTGATGTTGATGAGAACAAAACTTTGACATGGGAGGAAAGAATCAAGGTGTTGAAGGATGTAGCTCATGGATTATTGTATTTGCATGAAGGTTGGGAAGTTAGTGTCTTGCATAGAGACATCAAAGCAAGCAATGTGTTGCTTGATAAGGATATGAATGCCCGGTTGGGTGATTTCGGATTAGCTTGGATTTGTCATCATGGGCAGCCTACTAATACCACACAAGTGATTGGGACAGTTGGGTACATGGCACCTGAACTGGTTCAAAGAGGGAGAGCCTCAATTCATACTGATGTATTCAGTTTTGGTGTCTTGATTTTGGAGGTGGTATGTGGGAGAAGACCCACTGAACAAGATAAGCCAGGTTTGGTTGCTTGGGTTTGGAGGTTAATGGAGAGAGGAGAGTTATATGATGCTGTTGATGAACATTTAAAGTGGGGGAGAGATCATGAAACTGAAGAGGCTGAGAGGGTTCTTCGTCTTGGTTTGTTGTGCACACTGCCTGAGCCTTCTGCTAGGCCTACTATGAGACAGGTTGTGATGGTGTTGGAAGAAGAGAGGATGGATCTCAGCTTGATTGAAAAATTAAATTTTGCTGCTACCTCTGCTGTAAAGGCTGGAAGCTTCAGCTTTCACCCTACAGTTGAGGAAATTTCCAGATCCCGTATCTCTTTCACAACTCAGGAGGGTCGATGA 1983 0.4155 MSSPLIFLLFLLSSSSATEFIYNTNFNSSNILLSGNASLDSSILTLTNLTSFSIGRAFYPFKIPTKPSNSSSSPLPFSTSFIFSISPFKNVLPGHGFVFLLSPFTGTTGVSSAQHLGLFNLTNDGNPDNHVFGVEFDVFKNQEFNDIDDNHVGLDINSLTSFNSHAAGYWVGEDDGEFEVLKLNDGDNYQVWIDYRDSRVNVTMAPVGRKRPRRPLISELVNLSSVLLDEMYVGFCGATGQLMESHKILSWSFSNLNFSIGDALVTSNLPSFLLPKRSVTRSKGFIIGVSMGVFFVIGVASVIFVRFLGGKTNKRNEEETEDWEIEYWPHQISYEDISAATKGFSDQNVVGFGGNGKVYRGILQGVEVAVKRIPCESEKGMREFLSEISSLGRLKHRNVVPLRGWCKKERGNLILVYDYMSNGSLDKRIFDVDENKTLTWEERIKVLKDVAHGLLYLHEGWEVSVLHRDIKASNVLLDKDMNARLGDFGLAWICHHGQPTNTTQVIGTVGYMAPELVQRGRASIHTDVFSFGVLILEVVCGRRPTEQDKPGLVAWVWRLMERGELYDAVDEHLKWGRDHETEEAERVLRLGLLCTLPEPSARPTMRQVVMVLEEERMDLSLIEKLNFAATSAVKAGSFSFHPTVEEISRSRISFTTQEGR 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0733 660 CDD STKc_IRAK 350 614 - -
Acco08g0733 660 SMART serkin_6 344 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0733 660 CDD lectin_legume_LecRK_Arcelin_ConA 18 254 IPR001220 GO:0030246
Acco08g0733 660 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 307 419 - -
Acco08g0733 660 FunFam L-type lectin-domain containing receptor kinase S.4 16 261 - -
Acco08g0733 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Acco08g0733 660 Pfam Protein kinase domain 345 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0733 660 PANTHER - 30 615 - -
Acco08g0733 660 SUPERFAMILY Protein kinase-like (PK-like) 320 613 IPR011009 -
Acco08g0733 660 Pfam Legume lectin domain 18 255 IPR001220 GO:0030246
Acco08g0733 660 ProSiteProfiles Protein kinase domain profile. 344 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0733 660 ProSitePatterns Protein kinases ATP-binding region signature. 350 371 IPR017441 GO:0005524
Acco08g0733 660 Gene3D Transferase(Phosphotransferase) domain 1 420 628 - -
Acco08g0733 660 SUPERFAMILY Concanavalin A-like lectins/glucanases 9 254 IPR013320 -
Acco08g0733 660 Gene3D Phosphorylase Kinase; domain 1 308 419 - -
Acco08g0733 660 Gene3D - 16 264 - -
Acco08g0733 660 FunFam L-type lectin-domain containing receptor kinase S.4 420 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0733 Acco-ChrAcco08 6454971 6456953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0733 16 563 Receptor kinase-like Gene Family AT4G04960 61.552 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Acco08g0733 Pkinase 2e-46 CL0016